KEGG   Desulforamulus ruminis: Desru_1403
Entry
Desru_1403        CDS       T01518                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dru  Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:dru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dru02048]
    Desru_1403
Enzymes [BR:dru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desru_1403
Prokaryotic defense system [BR:dru02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desru_1403
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII AAA_22 Helicase_C HD Cas3_HD nSTAND_NTPase5
Other DBs
NCBI-ProteinID: AEG59675
UniProt: F6DQ97
LinkDB
Position
1427181..1429622
AA seq 813 aa
MDSERFIAHIRKADKSEQYVDEHNDQVAELASAIAESYGLAKIAKLAGRHHDDGKNTPEF
TAYIRAAVEGKRVVRGSVIHSTHGAILVNELASLKRNSRLTAEIVRTAIMSHHGLRDCLS
LDGDVVFVEAAENIADSYESVKETVYQRYGRDFINQEFIDAGLDTHVITKNIQELQKKSK
LLGSPYFYLAMFTRLITSIVIDADRTDTACFEDKRALPQRRALDERKEMWKKYLVHYESQ
LEKLQEGKKTSSLDPYRGEISRACAEFDGGEAGIFRLVVPCGAGKTLAALRYALHTARRY
GKERIFYIAPFNSILEQNATEIAKFIGDPDAVLEHHSNIIFSAEENKDKSEDEKRYQLLT
ENWAQSPVVATTAVQFLNTLFAGQTSCIRRMQALGNSVIILDEIQALPIKVLKLFNGAMN
FLASFCKSSVVLCSATQPLLDRVDHYRILPPRSIIENEEKYNEAFRRVQIVNCMKEQGYS
REEAADFIVSQLESTRSVLAIVNTKRSAREIFKHIQDKLGNETPYRIFHLSTNMCPAHRS
RVLKHLRERLKDTDLGEKIICISTSLIEAGVDVSFERVVRSLTGLDSIVQAAGRCNRNYE
TSCGIVSIINLRDERTSGQGYLKEAQKATQELLYSIKISPEGYPEGALSKDAMEEYYARY
FQPLLEEMAYRLKFDPEHTLLDLLTSNPSGQRGFEEKYPQERPPELKQAFKEAGGAFSVI
DDDGKVDVFIEYDEEARKRLQKLREATTLQEKRTALRQLQPYTVQLRDNDWIKTQRTALA
PEDGGILVLPPGYYDGEYGVDETLNIEMETLII
NT seq 2442 nt   +upstreamnt  +downstreamnt
gtggattcagagcgtttcattgcccatatccgcaaagcggataagagcgaacagtatgtg
gatgaacataatgaccaggtggcagagctggcttctgctatagccgagtcatacggtttg
gctaagattgccaaattggcgggacgacatcacgacgacggcaaaaacacgccggagttt
accgcatatatccgggcggcagttgagggaaagcgggttgtccgcggttcagtcatccat
tctacccatggtgctatactggtcaatgaattggcttctttaaagcggaattcccggtta
acggcggaaatcgttcggacggcgattatgagccatcacgggctgagggattgcctttct
ctggatggtgatgttgtgtttgtagaggcggcggaaaatattgctgattcctatgaaagt
gtgaaagaaacggtataccagcgttacggcagagattttatcaatcaggagtttatcgat
gccggccttgacacgcacgttattaccaagaacattcaagaattacagaaaaagagtaag
ttattaggttcgccctatttttatttggccatgttcacccgtttgatcacctccattgtt
attgatgccgaccggacagatacggcttgttttgaagataagagggctctgccgcagcgc
agagcattggatgagcgtaaagaaatgtggaaaaagtacttggtccactatgaaagccaa
ctagagaagttgcaagaagggaaaaagacatccagcctggatccttaccggggggaaata
tcgagggcttgtgcggaatttgacggcggtgaggcaggaatcttccgcttagtggtgccc
tgcggagccggaaaaaccttggctgctcttcgctatgctttacatactgctcggcgttac
gggaaagagcgcattttctatattgctcccttcaactccattttggagcaaaatgccaca
gaaattgccaagttcatcggggatcctgatgctgtactcgaacatcattccaatattatt
tttagtgctgaagagaataaagataaaagtgaagatgagaagaggtatcaactgctgacg
gaaaactgggcccagtctccggtggtggctaccaccgctgttcagttcctgaataccttg
ttcgcgggccaaacttcctgcatacgacggatgcaggctctgggaaattcggtaattatt
ctggatgaaattcaggcgctgccgataaaagttttaaaactgtttaatggagccatgaat
tttttagcgtccttttgtaagtcctctgtagtcctttgctccgcgacccagcccctttta
gacagagtagaccattaccggatcttaccgcctaggagcatcatagaaaatgaagaaaaa
tacaacgaagctttccggcgggtgcaaattgtgaactgcatgaaggagcagggctattcc
cgggaagaagcggcggacttcattgttagtcaactggaaagcaccaggtctgtgctggcc
attgtaaacacaaaacgaagtgctcgtgagatttttaagcatatacaggataagcttggc
aatgaaacgccatatcggatttttcacctgtccactaacatgtgccccgcccatcgcagc
agggtcttgaaacacctgcgtgagcggcttaaggatacggatttgggcgaaaaaatcatt
tgcatcagcacttcgttaattgaagcaggtgtggatgtttcctttgaacgggtcgtccgc
tccttgaccggactggatagcattgtccaggcggcgggacgctgtaaccgcaactatgaa
acctcctgcggcatcgtttcaattatcaatctccgggatgaacggacaagcggtcagggt
tatctcaaggaagctcagaaggccacacaggaattgctatacagcataaaaatatctccc
gaaggttatccggaaggggctttgtccaaggatgcaatggaggagtattatgcaaggtat
ttccaacctttgcttgaggaaatggcctatcgcctgaagttcgatccggagcacaccctg
ctcgatttgcttacaagcaacccttccggccaaaggggatttgaagaaaaataccctcag
gagcgacctcctgagctaaaacaggcctttaaggaagcaggtggggcattttctgtgatt
gatgatgacggaaaagtagatgtatttattgaatatgacgaggaagcgaggaaaaggctg
caaaagctgagggaggcaactacccttcaggaaaagcgtacagctttgcggcagctacag
ccctacaccgtgcagttaagagacaatgactggattaaaacgcagcggacagcccttgct
ccagaggatgggggtatcctggtgcttccccccggttactatgatggggagtatggggtg
gatgaaaccctgaatattgagatggagacgctgattatttaa

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