Desulforamulus ruminis: Desru_2006
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Entry
Desru_2006 CDS
T01518
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
dru
Desulforamulus ruminis
Pathway
dru00020
Citrate cycle (TCA cycle)
dru00190
Oxidative phosphorylation
dru00650
Butanoate metabolism
dru00720
Other carbon fixation pathways
dru01100
Metabolic pathways
dru01110
Biosynthesis of secondary metabolites
dru01120
Microbial metabolism in diverse environments
dru01200
Carbon metabolism
Module
dru_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Desru_2006
00650 Butanoate metabolism
Desru_2006
09102 Energy metabolism
00190 Oxidative phosphorylation
Desru_2006
00720 Other carbon fixation pathways
Desru_2006
Enzymes [BR:
dru01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Desru_2006
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
HI0933_like
FAD_oxidored
DAO
NAD_binding_8
AlaDh_PNT_C
Pyr_redox
FAD_binding_3
Citrate_ly_lig
Motif
Other DBs
NCBI-ProteinID:
AEG60262
UniProt:
F6DVA9
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Position
2020035..2021792
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AA seq
585 aa
AA seq
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MENHLIIVGGGLAGLMSAIKAAEMGVKVKLFSLVPVKRSHSVCAQGGINGAVNTKGEGDS
PLIHFDDTVYGGDFLANQRQVKEMCETAPAIINLMDRMGVMFNRTPEGLLDFRRFGGSKH
HRTAFAGATTGQQLLYALDEQVRRWEAAGMVEKYEGWDFLSAILDDQQVCRGIVAQDMKS
MEIRSFPGDAVILATGGCGMIFGKSTNSTINTGAAAGAVYQQGVYYANGEMIQIHPTAIP
GDDKLRLMSESARGEGGRVWTLKDGKPWYFLEEWYPAYGNLVPRDIATRAIYKVCYELKL
GIDGKNMVYLDVSHIDRNILDKKLAGILEIYERFVGDDPHKVPMRIFPAVHYSMGGLWVD
YDQMTNIPGLFACGECEYQYHGANRLGANSLLSAIYGGMVTGPNAVKYIRSLSKQAKDMA
GSLFEQEQKRQQSWMDQIYRMEGHENVYRLHEELGNWMTENVTVVRYNQKLQETDHKLQE
LIQRWSRIKLTDKGKWANQEAYFTRHLWHMLQLARVITLGALARNESRGAHYKPDFPHRD
DANWLKTTKAGFTGDGPILSYEEVDTSFIKPRPRRYDVDKEAAEK
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatcatttgatcattgtgggcgggggcctggccggcctgatgtccgccattaag
gctgccgaaatgggcgttaaagtgaaactcttttccctggttcctgtaaaacgttcccac
tcggtctgtgcccaaggaggcatcaatggcgctgtcaacaccaaaggagaaggggattcc
ccgctcattcattttgatgacaccgtttacgggggagattttttagccaatcagcgtcaa
gtgaaagaaatgtgtgagaccgcgccggctatcattaacctgatggaccgcatgggcgtg
atgtttaaccgcacacccgaagggctgttggatttccggcgctttggaggcagcaagcat
caccggactgcctttgccggcgctaccaccggccagcagttgctctatgctttggatgaa
caggtgcggcgctgggaagcggcgggtatggttgaaaaatacgaaggctgggattttctt
tccgctatcctggatgatcagcaggtttgccggggtattgtggctcaggatatgaaatcc
atggagattcgttcattccccggtgacgccgtgattctggccaccggcggctgcggcatg
atctttggcaaaagcaccaactccaccatcaataccggggcggcggccggcgccgtttat
cagcagggggtatactatgccaacggggaaatgattcagatccaccccacagccattccc
ggggatgataagctccggttgatgagtgaatccgccaggggcgagggtggacgggtttgg
accttaaaggacggcaagccctggtacttcctggaggaatggtatcctgcctacggcaat
ctggtacccagggacattgccacccgggccatctataaggtatgttatgagttaaagctg
ggcattgatggtaaaaacatggtctatttggacgtatcccatatcgaccgcaatatattg
gataaaaaactggcgggaatcttggaaatttatgaacgctttgtaggggatgatccccac
aaagtacccatgcgcattttccctgcggttcactactccatgggcggtctctgggtggat
tatgaccagatgaccaatattcccggcttattcgcctgcggcgaatgtgagtatcaatat
cacggagccaaccggctgggcgccaattcgctgctgtcagccatttacggcggtatggtt
acaggccccaatgcggtaaaatacatccgttccctaagtaagcaggccaaggatatggcc
ggctccctgtttgaacaggaacaaaaaaggcagcaatcctggatggatcaaatctatcgt
atggagggccatgaaaacgtataccggcttcatgaggagctgggcaactggatgaccgag
aatgtaacggtggtccggtataaccagaaacttcaggaaaccgaccacaaactgcaggaa
ttgatccagcgctggagccggatcaaattgacggacaaagggaagtgggccaatcaggaa
gcgtactttacccgtcatctctggcatatgctccagttggccagggtcattaccttaggc
gccctggcccggaatgaaagcaggggggctcactataagcccgacttcccccaccgggac
gacgccaattggctgaaaaccaccaaggccggctttacaggggatggcccgatcctaagc
tacgaggaagtggacacctctttcatcaaaccgcgtccgcggcgttatgacgtggataag
gaggcggcggaaaaatga
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