Desulforamulus ruminis: Desru_2090
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Entry
Desru_2090 CDS
T01518
Name
(GenBank) pyruvate formate-lyase PFL
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
dru
Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Desru_2090
Enzymes [BR:
dru01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
Desru_2090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PFL-like
Gly_radical
Motif
Other DBs
NCBI-ProteinID:
AEG60342
UniProt:
F6DK28
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All DBs
Position
complement(2096428..2098971)
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AA seq
847 aa
AA seq
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MDLKEFSNKFADATKDLSPEETAAIMKLFEGISKELSAQEPAMSNKAKSPAFEGEITGLT
PRLERLRAAYLKVKPSVSTYRARAFTQVAKENAGLPKILLRAKCFRKACETAPLLIQKDE
LIVGHPCGKPRAGAVSPDIAWRWIRDELDTMSTRPQDPFEISEEDKRILREEVFPYWEGK
SLDEICQQQYEEAGVWSFSGESFVSDLSYHQVNGGGDTCPGYDVILIKKGIAGVRQEAVD
RLSQLSMENPEDIDKIYFYKAEIETCDGILAYARRLSDYAGELAGREQDAVRQKELYKIS
DILTHVPAHPPRTFHEALQSIWTLESLFVVEENQTGISVGRLDQYIYPMFQADLEAGRMN
KREAFELLSCFIIKCSEVMWLSSELGAKYFAGYQPFINCTIGGQKRTGGDATNDLTYLIM
DAVRFTKMYQPSLACRIHNKSPQKYLKKIVDVVKAGLGFPACHFDDTHIKMMLAKGFSIE
DARDYCLMGCVEPQKSGRIYQWTSTGYTQWPIAIEFVLNRGIMKWRGTMEGIDTGDLDHI
KTYEEFDAACKKQLEHIIRLSAIGTIVSQRVHRDIAPKPLMSLLVEGCMEKGADVTHGGA
MINYGPGLIFSGLGTYADSMAAIKKLVFEEKKYTLKQIRDALAANFEGCEAIRTDCLNAP
KYGNDNDYVDEIASDIVTWTERVHNSFKMLYSHFTHGTLSISNNTPIGEITGAMPNGRLA
WAPLSDGISPTQGADKLGPTAIIKSVSKLNNEAMNIGMVHNFKLLRGILETPEGENGLIT
LLRTASILGNGQMQFSYVDNEVLKKAQIEPDKYRDLIIRVAGYSAYFVELCKEVQDEIIS
RTVLEHF
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
ttggatcttaaagagttttcaaataaatttgcggatgccaccaaagatttgtccccggaa
gaaacagcggccattatgaagctgtttgagggtatctccaaggagctttccgcccaggag
ccggcaatgtccaacaaggcaaaatcaccggcctttgaaggggaaattaccggactgaca
ccccgcctggagcggctgcgggccgcttatttaaaggtgaagcccagtgtcagtacctac
cgtgcccgggccttcacccaggtagccaaagaaaatgcggggctgcccaagattctgctg
cgggccaagtgctttagaaaagcctgcgaaacagcgcccctattgattcaaaaggatgaa
ctgattgttggacatccctgcggcaaacccagggccggcgcggtatccccggatattgcc
tggagatggatccgggatgaactggataccatgtccaccaggccccaggatccttttgaa
atcagcgaagaggacaagcggattttacgggaggaagttttcccttactgggaaggcaag
agtctggacgaaatttgtcagcagcaatatgaagaagccggcgtatggtccttttccggc
gaatcctttgtcagtgatctttcttaccatcaggttaacggcggcggagacacctgcccg
ggttatgatgtcattttgattaaaaaaggcattgccggcgtaagacaggaagccgtggac
cggttgagccaattgtccatggaaaatcccgaggacattgataagatctatttctataaa
gcggaaatcgagacttgcgacggcatcctggcttatgcccggcggctttcggattatgcc
ggggaactggccggccgggagcaggacgctgtccgtcagaaagagctttacaagatttcc
gatattttgacccatgtaccggcccatccgccccggacctttcatgaagcgctccagtcc
atctggaccctggaatccctgttcgtggtggaagaaaaccagaccggcatttccgtgggt
cgcttagaccaatacatttatcccatgttccaggccgacctggaagccggccgtatgaac
aagcgggaagcctttgaactattaagttgcttcatcatcaaatgctcggaagtcatgtgg
ctgtccagtgaactgggagcaaaatatttcgccggctatcagccctttatcaactgcacc
atcggcggacaaaagagaaccggcggcgacgccaccaacgatttaacctatctgattatg
gacgccgttcgttttaccaagatgtatcagccgtccctggcttgccgtattcacaacaaa
tcgccgcaaaaatatttgaaaaaaattgtggatgtggtgaaagccggtttgggcttcccg
gcctgccactttgacgatacccatatcaaaatgatgctggccaagggattctccattgaa
gatgcgcgggattattgcctcatgggctgcgttgaaccgcaaaagtccggcagaatttat
cagtggacttccaccggctacacccaatggcccattgccatcgagtttgttctgaaccgg
ggcattatgaaatggcgcggcaccatggaaggaattgatacgggggatcttgaccatatt
aagacctatgaagaatttgacgctgcctgcaaaaaacaacttgaacatatcatccgcctg
tcggccatcggcaccattgtcagccagcgggtgcaccgggatattgctcccaaacccctg
atgtccctgctggtagagggctgcatggaaaaaggcgccgatgttacccacggcggcgcg
atgatcaattacggtcccggactgatcttctccggcctgggcacctatgcggattccatg
gcagccattaaaaaactggtttttgaagagaagaaatatacgctgaaacaaatccgggac
gccctggctgctaattttgagggctgcgaagccatccggaccgactgcctgaacgcaccg
aaatatggcaatgacaatgattatgtggatgaaattgcctcggatatcgtcacctggacg
gaacgggttcacaacagctttaaaatgctgtactcgcactttacccatggaaccctttcc
atttccaacaacacgcccattggagagattaccggcgctatgcccaacggacgtctggcc
tgggcgcctctgtccgacggcatcagccccacccagggggccgataaactgggacccaca
gccatcattaaatcggtcagcaagctgaataatgaggccatgaatatcggcatggtgcac
aacttcaagctgctgcgcggtattctggaaacccccgaaggggaaaacggcctgattacc
ctgcttagaaccgcctccattcttggcaacggtcagatgcagttcagctatgtggacaat
gaagttttaaagaaagcccaaattgaaccggacaaatatcgggacctgatcattcgtgtg
gccgggtacagcgcttacttcgtagagctgtgcaaggaagtacaggatgaaattatcagc
cgaaccgttttggagcatttttaa
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