Desulforamulus ruminis: Desru_2638
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Entry
Desru_2638 CDS
T01518
Name
(GenBank) ATP-dependent nuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dru
Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dru03400
]
Desru_2638
Enzymes [BR:
dru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desru_2638
DNA repair and recombination proteins [BR:
dru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Desru_2638
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
AEG60864
UniProt:
F6DQH0
LinkDB
All DBs
Position
complement(2696483..2699956)
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AA seq
1157 aa
AA seq
DB search
MGLRFIIGRAGSGKSTACLEEIKKEIFRSQEGSSLILLVPEQATFQNEYRLAADPELGGT
VRVQVLSFRRLAYRVLQEAGGAVRAHIGELGKRMALRRILEQRRSELKIFHRAAKQPGFA
DSLAGMLGELKLYRVQPADLKKSGEKLVQEPAAGGLPDKLHDLNLLYGDLEEFLEGRFTD
PNDYLNLLAERLERSLLLREAELYIDGFTGFTPQEFYVIQKMLPLAKRLTVALCFDPALL
SGGYAEADVFHPTLETYHTLREMAESLRVPVEPVIAFSQEIPARFMDNRAVAHLERSFFS
RPAAGLPEEKGVKLAACANRRAEVEAAARELTRLARDQGLRWRDMVVMVRDLQAYHHLVS
TIFQDYGIPFFIDQKRTVDHHPLVELIRSALEVVLQNWAYDPVFRYLKTDLVPVGRDEVD
RLENYVLAHGIRGSRWTDDRPWTYCRRYTLGEDREPGEQERIELERINQIRSAAAGHLKE
FARAMAKAGAVREMTTALFELLDRLDIAGQLEQWAGEAEEKGRLTEAKEHAQIWNNVVQL
LDEIVETLGEETLTLEEYDRILDTGLESLKLGIIPPGLDQVVVGTLQRSRNPDVKAALVL
GVNDGVLPARTVEEGLLSDLEREQLQELGIRLAPGSRRKLLDEQYLVYIALTRASQCLWI
SYPQADDEGKGLHPSWVIHRMKELLPNLKELSVPVEPPHPEGEMDFIASPGRSLSYLASM
LREMKAGKTVDSLWLDVYSWFTRQEEWRSRCLRVLAGLDHVNQEAPLPGNLGRRLYGSRL
KASVSRLEKFAACPFAHFLSHGLKLKERGLFRLAAPDLGQFFHEALRMFAERVQDRSLDW
AQLTGEQAAAMTEEIVRELAPRLQNEILLSSARHRYFINKLKRIVHRAVLTLMEHARRGG
FRPVAMEMGFGDYGPLPSLDLDLGKDCQMEMSGRIDRIDAAREGDRLYLRVIDYKSGETD
LKIADIFQGLKLQLLTYLDVALRSSELLVRQPALPAGMMYFAVRDPLVSSPGPLPAEQAD
KNLLKQLKMKGLLLADPLVIAQMDNQIKGYSELLPVALNKEGQFYGNSRVITLEQFAGLR
QYLLAKLREIGRQMVAGQVQISPYQKGGEKSCRFCPFRAVCQFDPALEENFFRLFTDPED
EILWPFITGGSGGDSAE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgggccttcgatttatcattggcagggcgggcagtggaaaaagcaccgcctgcctggag
gaaataaaaaaggaaattttccgttcccaagagggttcctccttgattttgctggttccg
gaacaagcaaccttccagaatgagtatcggctggcggcggacccggaactgggcgggacc
gtgcgggttcaggtgctgagctttcgccgtctggcttaccgggtgctccaggaggcggga
ggagccgtgcgggcccatattggcgaactgggcaaaagaatggccctgcggcgcattctg
gaacagcgccggtccgaattaaaaatatttcaccgggcggccaaacagccgggatttgcc
gacagcctggcggggatgctgggagaattaaaactttaccgggtgcagcctgcggattta
aaaaagagcggggagaaactggtgcaagagccggcggccggcggcctgccggacaagctc
catgatttgaacctgctttatggtgacctggaggagtttctggaaggacggtttacggac
cccaatgactatctgaacctgctggcggaacggctggagcgttctttgttgctccgggaa
gcggagctatacatcgacggttttacgggttttactcctcaggaattttacgttatacaa
aaaatgctgcccctggccaaaaggctaaccgttgccctttgctttgatccggctttgtta
tccggcggatatgccgaggcagacgtctttcatcccacgctggagacgtaccataccctg
cgggaaatggccgaatccctgcgggttccggtagagccggtaatcgcctttagccaggaa
atcccggcccggtttatggataatcgggcggtggctcacctggaacgcagctttttctcc
aggcccgccgccggtctgccggaagaaaagggggtaaaactggcggcctgcgccaaccgc
cgggccgaggtggaagcggccgccagggaactgacgcgtctagcccgggaccaggggctg
cgctggcgggatatggtggtcatggtccgggatctgcaggcataccatcacttggttagt
accatttttcaggattatggcatccccttttttatcgaccaaaagagaaccgtggatcac
catcccctggtggaacttatccgcagcgcgctggaagtggtcttgcaaaactgggcttat
gacccggttttccggtatctgaaaacagacttggtaccggtggggcgggatgaagtggat
cgactggagaactatgttctggcccacggaatccggggttcccgctggacggacgaccgc
ccgtggacctattgccggcgctataccctgggagaagaccgggaacccggcgaacaggaa
cgcattgaattggagcgcatcaatcaaattcgttccgccgctgccggtcacttaaaagag
tttgcccgggccatggccaaagccggtgcggttcgggagatgaccaccgccctttttgaa
ctgctggacaggcttgatattgccggacagttggagcaatgggccggggaagcggaggaa
aagggccggctgaccgaggccaaggaacatgcccagatttggaacaatgtggtgcaactg
ttggatgaaatagtggagaccctgggggaagaaactttgaccctggaggaatacgaccgg
atactggataccggtttggaaagtttaaaattaggaattattcctccgggactggatcag
gtggtggtggggaccctacagcgttcccgcaatcccgatgtaaaggccgccttggtgctg
ggagtgaatgacggggtactgccggcccggacggtggaagagggattgttgtcggatctg
gagcgggagcaactgcaagagctgggaattcgcctggctccgggctcccggcgcaaactg
ctggatgagcaatacctggtgtatatcgccctgacccgggccagccagtgcctctggatc
agctatccccaggcggatgacgaggggaaagggctgcatccctcctgggtcattcaccgg
atgaaggaactgctgcccaacctgaaggaactttccgttcccgtagaacccccgcacccg
gagggggagatggacttcattgcctccccgggccgcagtttatcctatctggcgtccatg
ctccgggagatgaaggccggaaagacggtggactctctctggctggatgtctattcctgg
tttacccggcaggaggagtggaggagccggtgcctaagggtgctggccgggctggaccat
gtaaaccaagaggcccctttgccgggcaatcttggacggaggttgtatggcagccgcctg
aaagccagcgtatcacggctggagaaatttgctgcctgcccctttgcccactttctttcc
cacggtttaaagctgaaggagcggggtttgttcaggctggcggctccggatttgggacag
ttttttcatgaagccctgaggatgtttgcggaacgggttcaggaccggtccctggattgg
gcgcaactgaccggggaacaggccgcagccatgaccgaagagattgtccgtgaactggct
ccccggctgcagaatgaaattctgcttagttcagcacggcaccgttattttattaacaag
ttaaaaaggattgtccaccgggcggttcttacgctgatggaacatgccagaaggggcggt
ttccggccggtggccatggaaatgggttttggagactacggtcctttaccgtccctggac
ctggacctgggaaaggactgccagatggaaatgtccggccgtatcgaccggattgatgcc
gcccgggagggggatcgcctgtacctgcgggtaatcgattacaaatccggggagacggac
ttaaaaattgccgacatcttccagggcttaaaactgcaactgcttacctatctggatgtg
gccctgcgttcttcggaactgctggtgcggcagccggctcttccggcgggaatgatgtat
tttgccgtccgggatcctttggtttccagcccggggccccttccggcggagcaggcggac
aaaaacctgctcaagcagttaaaaatgaagggactgctgctggcggatcccctggtcatc
gcccagatggacaaccagattaaaggctactccgagctgctgccggtggccttgaataaa
gaaggacaattttatgggaactccagggtcatcactttggaacagtttgcaggattaagg
cagtacctgctggcaaagctcagggagattggccggcaaatggtggcggggcaggtgcag
atcagtccttatcagaagggcggggaaaaatcctgccgcttctgcccctttcgggctgtg
tgccagttcgatcccgctctggaggagaatttctttcgtttgtttacggatccggaggat
gaaatcctctggccctttataaccggcggttcaggaggtgattctgctgagtga
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