KEGG   Desulforamulus ruminis: Desru_2997
Entry
Desru_2997        CDS       T01518                                 
Name
(GenBank) CRISPR-associated HD domain protein
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dru  Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:dru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dru02048]
    Desru_2997
Enzymes [BR:dru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Desru_2997
Prokaryotic defense system [BR:dru02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Desru_2997
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD ResIII Helicase_C AAA_22 Cas3_HD PhoH HD NPHP3_N
Other DBs
NCBI-ProteinID: AEG61210
UniProt: F6DTN6
LinkDB
Position
complement(3063199..3065574)
AA seq 791 aa
MSQGHSSLRSHPHLLLHEHIDQVRIAMRALQQLHSSRTVTFRIQDIMERTAVFHDLGKAT
DFFQEYIKDPESYKGNSSDKAHTGLSVFLTLIIAKEQEWDVRDALMVVAAISGHHSRLPT
FSEQRVGFVDETKHAIERFANGSNVSTIQRQISSIDFEILSSEVNLEFNEIKTVRDSPQE
ITLLIRKALKFLNSKLIKENKNLYLQEAIAFRLKCQFIYSIMLEADKALLAVSDPAIYLM
RPVNQWQSKWIDKRIGKPDVTDTNCLRQKIRNEVVEVIANKRDSRIFNLTAPTGAGKTLL
AATWALKLRENTDNYWHPPKIIVVLPFLSVIDQTVNEYKKLLRVGGVENDSEWLLTSHSL
SDRVYDSELTTGDNSFLVDTWRNDIIITTYDQFLFSLIEPYAKYQMRFHNLCDALIIMDE
VQSLPCKLWQPLDEIFEQLTLVGNSKLLLMSATLPPFVKNAEPLLKNPNLYFAQCKRYCL
RLRLNTHISLDEFCLELEERLDDWFTQRLRVLLTFNTRKSARKVRDYIDDWRKGKDEFAD
IPLFFISADVTPKNRLQSIDKIKEGNPCIVVSTQCIEAGVDIDMDLIIRDFAPLDCLIQI
AGRCNREGGKETRGIIEIIDIVDEGKRYSEMIYDEVHLSVTRRLLKEYKEVLEEDILTLT
DCYFKELSVRKDTGFIHLERFARWQDDVSIRELLRGKEKQQYTFLVIEQDPTLYQDMCEI
MEIKNIWERREAWRRVAGRMAMVSVNVFVKPGFYPQQIAYEFKINTGLWILKDGYYSDDK
GLVVEGETMIF
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgagccaagggcatagcagtttgagatctcatcctcatttattattgcatgagcatatt
gatcaggtcaggattgctatgcgagctttgcaacaattacattcgtcacgaacagttaca
ttccgtattcaagacatcatggaacgcactgctgtattccatgacttgggaaaagcaacc
gatttctttcaggaatacatcaaagatccagagagttataaaggaaatagtagtgataaa
gcacatactgggttatctgtatttttaactttaattatagcaaaggaacaagaatgggat
gtgcgagatgccttaatggtggttgcagcgattagtggtcatcattcgcggttgccaact
ttttccgagcaacgagtaggttttgttgatgaaacaaaacatgcaattgaacgctttgct
aatggtagcaatgtttccaccattcaacgccaaatttcgtcaatagattttgaaatactg
tcttcagaagtgaatttggaatttaatgaaataaaaacggtaagagattcacctcaggaa
ataacattgcttattcgtaaggctttaaaatttttaaacagtaagctaatcaaggagaat
aaaaatttatatcttcaggaggctatagcctttcgacttaaatgtcaatttatatactca
attatgctggaagctgacaaagcattacttgctgtatctgacccagcaatatatcttatg
cgtcccgtaaatcaatggcaatcgaaatggatagataaacgtattggcaaaccagatgta
accgatactaattgtctacggcaaaaaatacgtaacgaagtagtagaagtaattgccaac
aagagagatagccgaatatttaacctcactgcaccaactggtgcaggaaaaaccttattg
gcagcaacatgggcgcttaaattacgtgaaaatactgataattattggcatccacctaaa
attatcgtagtattgccttttttatcggtgattgaccaaacagtgaatgagtataaaaaa
ttattacgagttggtggagttgagaacgatagcgaatggttattaaccagtcattcttta
tccgatcgagtatacgattctgaactaacgacaggtgacaatagctttttagtagacaca
tggcgaaatgatattataattactacttatgatcagtttttatttagtttgatagaacca
tatgcaaaatatcaaatgcgttttcataatctgtgcgatgcccttattataatggatgaa
gtccaatcattgccatgtaagttatggcaaccactagatgaaatatttgaacaattaact
ctagttggaaatagcaaattattgttaatgtcagcaaccttaccgccttttgtaaaaaat
gctgaacccttattaaaaaatcctaatctatactttgctcaatgtaaaagatactgcttg
cgtctgcggttaaatactcatataagtcttgatgaattttgtttagagttagaagaaaga
ttagatgattggtttactcaaagattgcgagtgttactgacttttaacacaagaaaaagc
gcacgaaaggttagagactatattgatgactggcgtaagggaaaagatgaatttgcagat
attccacttttttttattagtgctgatgttacccctaagaatcgtttgcagtctattgac
aaaattaaagaaggaaatccgtgtatagtagtttccacccagtgtattgaagcaggggta
gatattgatatggatttaattattagggattttgcgcctttagattgtctgattcaaatt
gctgggagatgtaatcgagagggtggaaaagaaacacgcggaataatagagattattgac
attgttgatgagggaaaacgttattctgaaatgatttatgacgaggtacatctttcagtt
actagaagattgctgaaagaatacaaagaagtactagaagaagatatactgaccttgaca
gattgttactttaaagaattatctgttaggaaagatactggatttattcacttggaaagg
tttgcacgatggcaagatgatgtctccatacgggaacttttacgaggtaaggaaaaacag
cagtatacgtttttggtgatagagcaggatccaacactataccaagatatgtgcgagatc
atggaaataaagaatatttgggagcgacgagaagcatggcgtagggtagctggtcgtatg
gctatggtatcagtaaatgtatttgtaaaaccgggtttctatccacaacaaattgcttat
gaatttaaaataaacacaggactatggatattaaaagacggttattattcagatgataaa
ggattagttgttgagggggaaacaatgattttttaa

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