Desulforamulus ruminis: Desru_3255
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Entry
Desru_3255 CDS
T01518
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dru
Desulforamulus ruminis
Pathway
dru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desru_3255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dru03400
]
Desru_3255
Enzymes [BR:
dru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Desru_3255
DNA repair and recombination proteins [BR:
dru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desru_3255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AEG61461
UniProt:
F6DVK1
LinkDB
All DBs
Position
complement(3310387..3311019)
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AA seq
210 aa
AA seq
DB search
MASNQWIFHQDMDAVQYLMASDARLAALIKEIGDYTLVLREDYFASLARAIIGQQLSVKA
VETIWMRTVHLCGGQVGPESLTELTEEQLQGAGLSKAKVSYLWDLQQKILAGELCFKEIC
HLSDEEVVTALTRVKGIGRWTAEMFLIFSLGRSNVWAVDDVGLRRAVKWLYRLDETPTGN
EMKSYGTRWSPYSSVASLYLWEAINRGLVK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcaatcaatggatctttcatcaagacatggatgccgtgcaataccttatggcc
tcggatgccagactggcggctttgatcaaagagattggcgattacaccttggttttaagg
gaagattattttgcttccctggctagagccatcatcggccagcagttatccgtaaaggcg
gttgaaaccatctggatgcgaacggtacatctttgcggcggacaggttggtcctgaatcc
ctgacagagttaacagaggagcagttgcagggtgccgggctgtccaaagccaaggtttct
tacctttgggatctgcagcaaaaaatattggctggggagctctgttttaaagagatttgc
catctgtccgatgaagaggtagtgaccgctttaacccgggtcaagggaatcggcagatgg
acggcggagatgtttttaattttctccctggggcggtcgaacgtgtgggctgttgatgat
gtgggactgcgcagggcagtcaaatggctttaccgcttggacgaaacacccaccggcaat
gaaatgaagtcctatggaacccgctggtcgccctacagctcggtggcctctttgtatcta
tgggaagccattaaccgaggtctggtaaagtaa
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