KEGG   Desulforamulus ruminis: Desru_3588
Entry
Desru_3588        CDS       T01518                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
dru  Desulforamulus ruminis
Brite
KEGG Orthology (KO) [BR:dru00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dru02048]
    Desru_3588
Enzymes [BR:dru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Desru_3588
Prokaryotic defense system [BR:dru02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Desru_3588
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N ResIII T1R_D3-like HSDR_N_2
Other DBs
NCBI-ProteinID: AEG61790
UniProt: F6DN99
LinkDB
Position
3631693..3634707
AA seq 1004 aa
MPYTEANYENAVLEVFRDTLGYGYSYGPDVVRDYSDPLYTDELLPALRRVNSKLPEVALS
EAVYKLRNFEGGTVLQKNVQFMDYLQNGVSVNYYDKGEQRSALVQLVDFDNIKQNTFTVA
NQWTITENSEKRPDVIVFLNGLPVVVFELKSPSREETDASEAYRQLRNYMKEIPSLFIYN
AFLVMSDLATSKAGTITADEDRFMEWKTKDGSYENTQYAQFDTFIEGMFEKGRLLDIIKN
FICFSGDAKILGAYHQYFAVRKAITSTAKATETDGRGGVFWHTQGSGKSLSMVFYAHLLQ
EILNSPTIVVLTDRNDLDDQLFGQFAKCADFLRQTPQQAESRIHLKELLAGRQANGIIFT
TMQKFEESSEALSDRRNIIVMADEAHRGQYGLEEKVDAKTGRVILGTARIIRDSLPNATY
IGFTGTPISSKDRSTIEVFGNYIDIYDMTQAVEDGATRPVYYESRVIHLKLDEDVLQLID
AEYDIMGENAEPYAIEKSKKELGQMESILGADQTITALCEDIVKHYEENRQYELTGKAMI
VAYSRPIAMKIYHKILQMRPDWTEKLGVVMTSGNNDPEEWREIIGNKRHKDEMAKKFKDN
NSPLKIAIVVDMWLTGFDVPSLATMYVYKPMAGHNLMQAIARVNRVYKNKEGGLVVDYVG
IASALKQAMNDYTNRDKQNYGEQDIAKTALPKFIEKLEVCRDLFHGFDYAGFMDAKATDL
ARAKAISGGVNFLSGIDKEKQRESFVKEAMLLRQALSLCRSLLKPEQRFEAAYFEAVRTL
LTRITGEGKPLSLKEINARVNELLKASIQSEGVINLFSDIDTGFSLFDPKFLEEIAKMKE
RNLAVEILKKLLAEQVSLYRRTNLVKSEKFSEMLSRAMKAYLNGMLSNEEVIAELMKMAK
DMANAQAEGDALGLNDEELAFYDALTRPEAVKDFYQNEELVAMTHELTDMLRKNRTIDWQ
KKESARAGMRRMVKKLLKKYKYPPDGMEDAIATVIGQCEMWADN
NT seq 3015 nt   +upstreamnt  +downstreamnt
atgccatataccgaagcaaattatgaaaatgcggtgcttgaggttttccgcgacacattg
ggttacggctattcctacgggcctgatgttgtgcgcgattattccgacccactgtataca
gacgagttgctgcctgccctgcggcgcgtcaactcgaaactcccggaagttgcactctcc
gaggcggtttataagctgcgcaatttcgaaggtggcacggtgttgcagaaaaacgtccaa
tttatggactacctccaaaacggcgtatcagtgaattattatgacaagggtgaacaacgt
tccgcactcgttcagcttgtggactttgataacatcaagcaaaacactttcactgtcgct
aaccagtggactattaccgaaaacagtgagaaacgtccagatgttattgtgttcctgaac
ggtctgcctgtagtggtattcgagttaaagtcaccgagtcgcgaggaaaccgatgctagc
gaagcttatcgccagcttcgtaactatatgaaagagatcccatccctgttcatctacaac
gcttttcttgtgatgagcgacctcgccacttccaaagcgggtacaatcaccgccgatgaa
gaccgttttatggaatggaaaacaaaagacggcagttacgaaaatacgcagtacgcccag
ttcgacaccttcattgaaggaatgttcgagaaggggcgactgcttgatattatcaagaat
tttatctgcttctccggcgacgcgaagattcttggtgcctatcaccaatattttgccgtg
cggaaggccattacttccaccgccaaggcaaccgaaacagacgggcgtggcggtgttttt
tggcatacgcaaggcagtggcaagtcattgtctatggtattctacgcccatcttttacag
gagatattgaactcccctacaatcgttgtgctgaccgaccgtaacgaccttgacgatcag
ctgttcgggcaatttgcaaagtgtgcggacttcctgcgccaaacgccccaacaagccgaa
agccgtattcatttaaaagagcttctcgcggggcggcaagcgaacggtattatcttcact
acgatgcaaaagtttgaggaatcctccgaagccctctccgaccgacgcaacatcatcgtt
atggcggacgaggcgcaccgtgggcaatatggacttgaggaaaaggtggatgccaagaca
ggacgtgttatcctcggtacggctcggattatccgtgacagcctgccaaatgcgacctac
ataggatttactggcacccccatctcctcgaaagaccgctcgacaattgaggttttcggc
aattacattgatatctacgatatgactcaagctgtggaggacggcgcaactcgcccggtc
tactatgagagccgggttattcacttgaaattagacgaggatgttttgcagctaatcgat
gccgaatacgacattatgggtgagaatgccgaaccatatgccatagagaaaagcaaaaag
gaacttgggcagatggaaagcatccttggtgccgaccagacgataactgccctgtgtgag
gacatcgtaaagcattatgaggaaaaccgccagtatgaactgactggcaaggcaatgata
gttgcttactctcgcccgattgctatgaagatttaccataagattcttcaaatgcgtcca
gattggacagaaaaacttggtgtggtgatgacaagcggtaacaacgaccctgaagaatgg
cgcgagatcatcggcaataagcgccacaaagacgaaatggcgaagaagttcaaggataat
aacagcccccttaaaatcgccattgtggtggatatgtggctaacaggattcgatgttccg
agccttgcaacgatgtacgtttacaagccgatggcgggtcataatcttatgcaggcaatc
gcacgcgtcaatcgcgtttataagaataaagaaggcggcttagtggttgattatgttggt
atcgcgtccgcgctgaaacaggcgatgaacgactacaccaaccgtgataaacagaactac
ggggaacaggatattgccaagaccgccctcccgaagtttattgaaaagttggaagtttgc
cgtgacttgttccatgggtttgactacgccggctttatggacgcgaaagctacagacctt
gcccgcgccaaggcaatcagtggcggcgtaaacttcctgtctggtatagataaagaaaag
cagcgcgagtctttcgttaaagaggctatgctgctccgtcaggcgttgtcactctgtcgc
tcactccttaagcctgaacagcgatttgaagcggcatattttgaagcagttcggactctc
ctaacccgtattacgggcgaaggtaagccgctgtccctgaaagaaataaatgcccgcgtc
aacgaactgttaaaagcgagcattcagagcgaaggcgttataaacctgttttctgatata
gatacggggttctcgcttttcgacccgaagtttctcgaggaaatcgctaagatgaaggaa
cgcaacctcgcggtagaaatccttaaaaaacttctcgccgagcaagtatcgctctaccgt
cgaacgaatcttgttaagtcagaaaagttttccgaaatgctatcccgtgcaatgaaagcg
tacttgaacgggatgctttccaatgaggaagttattgccgaactaatgaagatggcaaag
gacatggcaaacgctcaagcggagggcgacgcgcttggactgaatgatgaagagctggca
ttctatgatgctctgactcgtcccgaagcagtaaaggatttctatcaaaatgaagaactt
gtagcaatgactcatgagcttaccgatatgctccgcaagaaccgcactatcgactggcag
aagaaagaatctgctcgcgccggaatgcgacgcatggtaaagaagctgttgaaaaaatat
aaatacccgcctgatggtatggaagatgcaatcgccaccgtaattggtcagtgcgagatg
tgggcagataactaa

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