Maridesulfovibrio salexigens: Desal_0043
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Entry
Desal_0043 CDS
T00969
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Desal_0043
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsa03400
]
Desal_0043
Enzymes [BR:
dsa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Desal_0043
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Desal_0043
DNA repair and recombination proteins [BR:
dsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Desal_0043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ACS78115
UniProt:
C6BUX8
LinkDB
All DBs
Position
45992..46816
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVEVISRGLAESLEGKTIESVKILNHSSVKMPWYLFSSRVAGEKITRIHRRAKLL
IMDLGDDLHITFHLKMTGRVLAHEGPTTPEPHTRIVFGLTDGGSIEFHDTRKFGEVRALN
NEELQEWDFYKNLGPEPLEVTAEELAERITGRKAQIKGLLLNQSVVAGCGNIYADESLFR
SGIHPKAKASDLSNESLVKLFTELQAVLKQAIQENGSSIRDYVDAGGDAGGFQNSFKVYG
KKGEPCPDCGKIFEGATVAGRTSTFCSNCQKMKD
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccggaagtagaagtaatctcccgtggtcttgccgaatctcttgaaggc
aagacaattgaatctgttaaaattctcaaccacagttctgtaaaaatgccgtggtatctg
ttttcctctcgcgtggcaggggagaagattacccgcattcatcgtcgcgctaagttgctg
atcatggatcttggcgatgatttgcatataacctttcatcttaagatgaccggaagggtc
cttgctcatgaaggcccaaccaccccagagccgcacacccgtattgttttcggtcttacc
gacggcggttctattgaatttcacgatacccgcaaattcggagaagtacgcgcattgaac
aatgaagagcttcaggaatgggatttttataagaatctcggtcccgagcctctggaagta
acagccgaagaactcgcggaacgtatcaccggacgcaaggcccagatcaagggcttactg
ctcaatcagtccgtagtggccgggtgcggaaacatttatgctgacgaatccctgtttcgt
tccggcattcatcccaaggcaaaggcatccgatctttctaatgaatctctggtgaaactg
ttcactgaattgcaggctgtgcttaagcaggcaattcaggaaaacggtagttccatccgc
gattacgtggatgcgggcggtgatgccggaggctttcagaacagttttaaagtttatggc
aagaaaggcgagccctgtcccgattgcgggaagatatttgaaggcgctaccgtcgcggga
cgtacttccactttttgcagtaattgtcagaaaatgaaggattag
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