Maridesulfovibrio salexigens: Desal_0998
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Entry
Desal_0998 CDS
T00969
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dsa
Maridesulfovibrio salexigens
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsa03016
]
Desal_0998
Enzymes [BR:
dsa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Desal_0998
Transfer RNA biogenesis [BR:
dsa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Desal_0998
Prokaryotic type
Desal_0998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ACS79063
UniProt:
C6C0C9
LinkDB
All DBs
Position
complement(1118060..1118992)
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AA seq
310 aa
AA seq
DB search
MGRKPKKSPFQKHGVLVLNKPSGPTSTDCLNSIKRELKQYKIGHAGTLDPLAEGVLLVML
GQATKLGPYLLGHDKVYTGSLSIGRTTDTYDIQGTETSTGDISEITEKMVENEILHWNDL
TSQEVPAYSAAKHNGKPLYELARKGEETPVKIKSIEIFDAEPLEVSLPMARFRVGCSAGT
YIRSLVHSLGSRLGCGAVMESLRREESRPFRLSEAHNLDEVLADPEGFEARIIPLADALP
HWHKFTVSENMSKSIKNGTRIPVGDIAADQEIIEGERAMFLESDGTALALMETKQIDGKL
LWVILRGLWG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaaaacctaaaaaaagcccgttccagaaacatggtgttctggttctcaataaa
cccagcggtccaacttctacagattgtctcaattccatcaaacgtgaactgaagcaatac
aagatcggccatgccggcacccttgatcctctagccgagggcgtgctgctggtaatgctc
ggtcaggccacaaaactcgggccttatctgctgggacatgataaagtgtacactggtagt
ttaagtatcggcagaactacagatacttacgatattcagggcactgaaacatccaccgga
gacatttctgaaattacagaaaaaatggtggaaaatgaaattttacactggaatgacttg
actagtcaggaagttcctgcctattcggctgcaaagcataatggcaaaccgctctatgaa
ctggccagaaaaggggaagaaaccccggtcaaaatcaagagcattgagatatttgatgca
gaaccgctggaagtgagtctgccaatggcccgtttccgggttgggtgctctgctggcacc
tacattcgctccctggtccatagcttggggtcgcggctcggatgcggcgcggtaatggaa
tcacttaggcgtgaagaaagccggcctttcaggctgagcgaagcgcacaacctcgatgag
gttcttgccgatcctgaaggatttgaggcacggatcatcccacttgcggatgccctgccc
cattggcacaagtttaccgtttcggaaaacatgtccaagtccatcaagaacggaacaagg
atacctgtcggggatattgctgctgatcaggaaattatcgaaggtgaaagggctatgttc
cttgaatccgacggtacagctctggctcttatggagacaaagcagatcgacggcaagctt
ctctgggtaattcttcgcggcctgtggggctga
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