Maridesulfovibrio salexigens: Desal_1211
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Entry
Desal_1211 CDS
T00969
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Desal_1211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsa03021
]
Desal_1211
03400 DNA repair and recombination proteins [BR:
dsa03400
]
Desal_1211
Enzymes [BR:
dsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Desal_1211
Transcription machinery [BR:
dsa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Desal_1211
DNA repair and recombination proteins [BR:
dsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Desal_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACS79274
UniProt:
C6C1B1
LinkDB
All DBs
Position
1332423..1333463
Genome browser
AA seq
346 aa
AA seq
DB search
MLIQDGDKLINTRNWAELVKPEQLVRDPKSNELYGKFICEPLERGFGTTIGNSLRRVLLS
SMQGAAAVAVKIEGVQHEFTTIEGVMEDVTEIVLNIKQIRFAMTTDEPQFLTLRVNKQGV
VTAADIQENQNVKVLNPEQIIATLSEKMDMEMTFEIRMGKGYVPADMHEGLVNEIGHIIL
DSSFSPIRKVAYSVEQARVGQMTNYDKLIIEVFTDGSVTPEDAIAYSAKILKDQLSVFIN
FDEMGSEQEESKESDLDLNPNLFKSIDELELSVRATNCLKAANIRIVGELVQRTEQTMLK
TKNFGRKSLDEIRRVLDSMELKFGMVLEDFDKKHQEWLKRKEKNEA
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcttattcaagacggtgacaaactcatcaacacccgcaactgggccgagctggttaag
ccggaacagcttgtgcgtgaccccaagtctaacgagctttatggtaagttcatttgtgaa
ccccttgagcgcggatttggaacaaccatcggtaactctctccgcagagtactgctctct
tcaatgcagggagctgccgcggttgctgtaaagatcgaaggagttcagcacgaattcacc
actattgaaggtgtgatggaagatgtgactgagattgttctgaacatcaagcagatcaga
ttcgcaatgactacagatgaaccccagtttcttacccttcgggtcaataagcagggcgtc
gtcaccgcagctgatattcaggaaaaccagaacgtcaaagtcctcaatcctgagcagatt
attgcgactctgtccgagaagatggacatggagatgactttcgagatccgcatgggtaaa
ggttacgtacctgcagacatgcacgaaggtcttgtcaatgaaatcggtcacatcattctt
gattccagcttttctcctatccgtaaggtagcttacagtgtggagcaggctcgtgtcgga
cagatgaccaactacgacaagcttatcatcgaagttttcaccgatggttccgttacccct
gaggatgcaattgcctacagtgcaaagatcctcaaggatcagctctccgtattcatcaac
tttgatgaaatgggatccgagcaggaagagtccaaagaaagcgacctcgatctcaacccg
aatctgttcaagagcatcgacgaactcgaactctccgttcgtgctaccaactgcctcaag
gcagctaacattcgcattgttggtgaacttgtgcagcgcactgagcagaccatgcttaaa
accaagaacttcggacgtaagtctctcgacgaaatccgccgcgttcttgacagcatggaa
cttaagttcggtatggtcctcgaggatttcgataaaaagcatcaggaatggctgaagagg
aaagagaaaaatgaggcataa
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