Maridesulfovibrio salexigens: Desal_1456
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Entry
Desal_1456 CDS
T00969
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
dsa
Maridesulfovibrio salexigens
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsa03016
]
Desal_1456
Enzymes [BR:
dsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Desal_1456
Transfer RNA biogenesis [BR:
dsa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Desal_1456
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACS79518
UniProt:
C6BRS8
LinkDB
All DBs
Position
complement(1589920..1591983)
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AA seq
687 aa
AA seq
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MSLFKEGRYVAPGNIVEFMHGNQPQLAFVMEEQSGKLKLYTINKRETKMPAARVLPWVGP
QYSASASRQEMLDYMVAHQEKRGELQAGLDTMEIWDLAQGEVEKAPLNWFAGLLWEEPDA
DHISALGRAMIAAKTHFKFQPPEFIIYTKEKVELRLQQQAEEKAHEEIMSVGQDLFKKIW
TARESGGKIRPDQIPDMSDEIAEGLKSFLMDRVAGLNEDKSNKMWSALRKGLPDHPHLPL
LLAQGWGIVHPHHNYLLDEAEYVFDDSWSAAHKDEIDRLVKAVETKAGDPCPLPMRSIDS
ATTKDIDDAFNLKRREDGGYTLTIALARPCMDWDFGSALDQAVMNRGTSVYLPEGTSHMM
PEALGIGAFSLFSGEVRPALVTTFELDEHGILQSVTPHISWVKITDNSTYLAVEQMLEEG
SDDEMTLAFELSEKLLQERIKHGAIVIRRPEPELSLQGWPQQTKVLMSAKEKTTRADQII
SEFMILANSGLGKFAEENDFPLLYRTQDIALPSDLSGIVTEPHEIYMRVRQMVPPQMDTV
PKKHATLAVSGYSPITSPLRRYADFINMAQLCHYLVEEQPKWDTDELKSLAENLQLRLQS
VIKIQRFRPRYWKLLYLAQNRKGWHHAVVVDDNGPLATLAMPEIQINVRVPRPMLGDKLY
PGQGFQIRFNKIDPLTNELRVVEAMEE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgtccctatttaaggaaggacgttacgtagcgcccggaaatattgtagaattcatgcat
ggcaaccagccgcaactggcatttgtcatggaagagcaatccggaaagctcaagctctat
accatcaacaagcgcgaaaccaagatgcccgctgcacgggtactcccttgggtaggaccg
caatattccgcttctgcctcccggcaggaaatgctcgactacatggtcgcccatcaggaa
aaaagaggcgaacttcaagccggacttgataccatggaaatctgggatctggctcaggga
gaagttgaaaaagctcccctgaactggtttgctggtcttctctgggaagaaccggatgca
gatcatatttccgccctcggcagggctatgatcgcagctaaaacccatttcaaatttcag
ccgcctgaatttattatctacactaaagaaaaagtggaactccgccttcagcagcaggcg
gaagaaaaggctcatgaagaaatcatgagtgtcgggcaggatctcttcaagaaaatctgg
accgcccgtgaatccggcggaaaaatcagaccggaccagattccggatatgtccgacgaa
atagcagaaggtctgaaatcatttcttatggacagagttgccggcctgaacgaagacaaa
tcaaataagatgtggtctgctctacgtaaaggactgcccgatcacccccacttaccgctt
ctgctggctcaaggctggggaatagtacatcctcatcacaactacctgctggatgaagcg
gagtacgtttttgatgacagctggtccgctgcacacaaagatgaaatcgacagactggtc
aaagctgtggagacaaaagcaggcgatccctgtccattgcccatgcgcagcattgactcc
gcgaccacaaaagacattgatgacgccttcaacctcaaaaggcgcgaagatggtggatac
accctgaccattgcacttgcccgtccctgtatggactgggatttcggctccgctcttgat
caagcggtcatgaaccgtggaaccagcgtatacctgcccgaaggcaccagccatatgatg
ccggaagctcttggcataggtgcattcagtcttttttccggagaagttcgtcccgcactt
gtcaccacttttgagcttgatgaacatggtattttacagtcggttacacctcatatcagc
tgggtaaaaatcaccgacaactccacctatcttgcagtagaacagatgctggaagaaggc
agtgacgatgaaatgactctcgcttttgagctttctgaaaaacttttgcaggaacgcatc
aagcacggagcaattgtcatccgcagacctgagccggagctttcccttcaaggatggccg
cagcagaccaaagtactcatgtccgccaaggaaaagactacccgggcggaccagatcatc
agtgaatttatgatcctcgccaactccgggctgggcaaattcgcagaagagaatgacttc
cccctgctctaccgcacgcaggatattgctctgccttccgacctgagcggaatagtcaca
gagcctcacgaaatttatatgcgggtacgccagatggtccccccgcaaatggatactgtt
cctaaaaaacacgccacacttgcggttagcggatacagccccattacgtcccctctgcgg
agatacgcagacttcatcaacatggcccagctttgccattaccttgttgaagaacagcct
aaatgggatactgacgaactgaaatctctcgccgaaaatcttcagcttcgcctgcaatct
gtcattaaaatccaacggttcaggccgcgttactggaagctgctctatctggcccagaac
aggaaaggctggcaccatgcggttgtagtagatgataacggcccccttgccacgctggct
atgcctgaaatccagatcaatgtcagggttccccggcctatgcttggggacaagctgtat
cccggccaaggtttccagatacgtttcaacaaaatagacccgctgaccaacgaactgcgt
gttgttgaggctatggaagaatag
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