Maridesulfovibrio salexigens: Desal_2335
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Entry
Desal_2335 CDS
T00969
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03420
Nucleotide excision repair
dsa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Desal_2335
03430 Mismatch repair
Desal_2335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsa03400
]
Desal_2335
Enzymes [BR:
dsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Desal_2335
DNA repair and recombination proteins [BR:
dsa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Desal_2335
MMR (mismatch excision repair)
Other MMR factors
Desal_2335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_22
RecR_HhH
HHH_5
Terminase_6N
HHH
Motif
Other DBs
NCBI-ProteinID:
ACS80391
UniProt:
C6BX85
LinkDB
All DBs
Position
2566584..2568707
Genome browser
AA seq
707 aa
AA seq
DB search
MIDFKNELNPAQYEAATHPQGPVLVIAGAGSGKTRTIVYRLAWLVEQGIPPESILLMTFT
RKAAQEMLQRTELILGRNLHGTQGGTFHAFAYSVLRQNAAEIGFPNGITLMDRSDSEAAV
KEVKDQLKFGKGDRSYPKKSTLLDMISKSRNKELSIDTLVNSEAFHLATYASEMEQIAKG
YAVYKKQHGLMDYDDLLFYLEELLTKDKFLRNSLRSRYQYIMVDEYQDTNLVQARIVGLL
AGKNGNVMAVGDDAQSIYSFRGADVTNILKFPDIFEDVKIVRLEQNYRSTQPILDLTNAI
LDGAETKFDKKLFTEQTWGDKPQLMVPLSDFSQSNRVLDRIIELQKKHGPEEVAVLFRAG
YQSYGLEVALKRLGVGFKKYGGLKFNEAAHIKDVLAFMRLVSNPADIIAWQRTLGHIKGV
GPKTATKIAQAVISADQKALGKFTKKYQLLQDILRDLDGLRKKNSSPATCLEIIVPLYRP
LLVAQYPDDYPRREAGIEQLSQIASNYDDLEFFLTDLCLDPDQHSEEEKKEDVVTLSTIH
SAKGLEWNAVIIIDLVEDRFPSRKSMQKPQEYEEERRLLYVACTRARKELIMCAPASINR
KNTDFSEPAVPSPFLRELDNALFDELQESYSGGMAKKKNAPVNPAAYTDTAPSISASKKP
SPMKLGHCKHKIFGRGKIIERIEPNKLRINFPGFGPKVIVEDFVEML
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattttaaaaatgaattgaacccggcacagtacgaagcagctacacatccacag
ggtcccgtgctggtaattgcgggtgctggcagcggcaaaacccgtacaattgtataccgt
ctggcatggttggtagaacagggcatcccgccggaatccattctgctgatgaccttcacc
cgtaaggctgcgcaggaaatgcttcagcgtaccgagctgattctgggcagaaatctgcac
ggcactcaaggcggaacattccacgctttcgcttattccgtactgcgtcaaaacgcggct
gaaatcggctttccgaatggcataaccctcatggaccgcagtgactctgaagccgcagtc
aaagaagtaaaagatcagcttaaattcggtaagggagaccgctcataccccaaaaaatcc
accctgctggatatgatcagcaagtctcgtaacaaagaactttccattgatacgctggtc
aattccgaagctttccatctggcaacctacgcttccgaaatggaacaaatagctaagggc
tacgctgtttataaaaaacagcacggtttgatggattatgacgacctgctcttctacctt
gaagaactgctgacaaaagacaaattcctgcgtaattccctgcgttcacgctaccagtac
atcatggtcgatgaatatcaggataccaaccttgtgcaggctcgcattgtcggtttgctg
gccggaaaaaacggaaacgtcatggctgtaggtgatgatgctcagtccatctattctttc
cgtggcgcggatgtaaccaacatccttaaatttcctgacatttttgaagacgtaaaaatt
gtacgtctggaacagaactatcgttccacacagcccatccttgatctgaccaacgctatt
ctggacggggctgaaacaaaattcgataagaaacttttcaccgaacagacatggggcgat
aagccgcaactcatggttccgctcagcgatttcagccagtccaaccgcgtgctggaccgg
atcattgaattgcagaaaaaacatggtcccgaagaggtcgcagtacttttccgcgccgga
taccagagttacggtctggaagttgccctgaaacgattgggtgtaggattcaaaaaatac
ggcggcctgaaattcaacgaagccgcacacatcaaagatgttctggctttcatgcgtctg
gtcagcaatccagcggacattatcgcatggcaacgcacccttggacatatcaagggagtc
ggacccaaaaccgccactaaaatcgcacaggctgtaatttctgctgaccagaaggcactt
gggaaattcaccaagaaatatcagttgctgcaggacatcctgcgtgaccttgatggacta
aggaagaaaaactcttctccggcaacctgtcttgagatcatagttccgctctacaggccg
ttactggttgcccagtacccggacgattacccgcgccgcgaagccggaatcgaacagctc
agccagattgcatccaactacgatgatctggaatttttcctgaccgacctctgccttgat
cctgatcagcacagcgaggaagaaaaaaaagaagatgtggtcactctctccaccattcat
tccgccaaaggactggagtggaatgcggtcatcatcattgaccttgtggaagaccgtttt
ccttcccgcaaatccatgcaaaagcctcaggaatacgaggaagaacgccgtctgctttac
gtggcctgtacccgcgcacgcaaggagctgatcatgtgcgccccggcatccatcaaccgc
aaaaacaccgacttctccgaacctgcggtgcccagtccatttctgcgtgagcttgataac
gcactctttgatgaattgcaggaatcctattccggcggcatggcgaagaaaaagaatgct
ccggtaaatcctgctgcctataccgatacagctccttcaatctcagcttccaagaagccc
tcgcccatgaagctggggcattgcaagcacaagattttcggacgtggcaaaatcatcgaa
cgcatcgagcccaacaagctgcgcatcaatttccccggctttggaccaaaggtcattgtc
gaagattttgtggagatgctgtaa
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