Maridesulfovibrio salexigens: Desal_3024
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Entry
Desal_3024 CDS
T00969
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dsa
Maridesulfovibrio salexigens
Pathway
dsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Desal_3024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsa03019
]
Desal_3024
03110 Chaperones and folding catalysts [BR:
dsa03110
]
Desal_3024
03029 Mitochondrial biogenesis [BR:
dsa03029
]
Desal_3024
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsa04147
]
Desal_3024
Enzymes [BR:
dsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Desal_3024
Messenger RNA biogenesis [BR:
dsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Desal_3024
Chaperones and folding catalysts [BR:
dsa03110
]
Heat shock proteins
HSP60 / Chaperonin
Desal_3024
Mitochondrial biogenesis [BR:
dsa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Desal_3024
Exosome [BR:
dsa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Desal_3024
Exosomal proteins of other body fluids (saliva and urine)
Desal_3024
Exosomal proteins of breast cancer cells
Desal_3024
Exosomal proteins of colorectal cancer cells
Desal_3024
Exosomal proteins of bladder cancer cells
Desal_3024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Lar_N
REF
Motif
Other DBs
NCBI-ProteinID:
ACS81076
UniProt:
C6C0X9
LinkDB
All DBs
Position
3354849..3356522
Genome browser
AA seq
557 aa
AA seq
DB search
MAKQILFDAKAREKLKLGVDKLANAVKVTLGPKGRNVVMDKSFGSPVITKDGVSVAKEIE
LEDKFENMGAQMVKEVASKTSDIAGDGTTTATILAQAVFTEGVKLVAAGRNPMAIKRGID
KAVEAIIDHLETLAKPTRDQKEIAQVGTISANNDVTIGNIIAEAMNKVGKEGVITVEEAK
GLDTTLDVVEGMQFDRGYLSPYFVSNAEKMICEMDEPLILISEKKVTSMKELLPVLEQVA
KMGKPLVIIAEDIEGEALATLVVNKLRGTLNVVAVKAPGFGDRRKAMLADIAALTGGAVV
SDDIGLNLEAVTLDHLGSAKRVVIDKENTTIVDGAGEGEMIKARIGQIRNEIELSTSDYD
REKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALNATRAAVEEGIVPGGGTALIR
CIPALENVTSSDDDESAGIDIIRRAIEEPLRQIAGNAGLEGSIVVEKVKEAKDGNGFNAA
IGEYEDLIKAGVIDPKKVTRIAIQNAASVAGLLLTTECAIAEKPEKAADMPAGMPGGMPG
MGGMGGMGGMGGMGGMY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacagattcttttcgacgccaaagctcgtgaaaaactgaaactcggcgtagac
aagctcgccaatgctgtaaaagtaaccctcggacccaaaggccgtaacgttgttatggac
aaatccttcggctccccggtcatcaccaaagacggtgtttccgtagctaaggaaatcgaa
ctggaagacaagttcgaaaacatgggcgcacagatggttaaggaagttgcttccaaaacc
tccgacatcgcaggtgatggtaccactactgctaccatccttgctcaggctgttttcacc
gaaggtgttaaactcgttgcagccggccgtaaccccatggctatcaagcgcggtatcgat
aaagctgttgaagcaatcatcgatcacctcgaaacccttgcaaagcccacccgcgaccag
aaagaaatcgctcaggtcggtaccatctccgcaaacaacgatgtaaccattggtaacatc
attgccgaagccatgaacaaggtcggcaaagaaggcgttatcaccgttgaagaagcaaaa
ggcctcgacaccactcttgatgttgttgaaggtatgcagttcgaccgcggttacctctcc
ccctatttcgtatccaacgcagaaaaaatgatctgcgaaatggatgagcccctgatcctg
atcagcgaaaagaaagtaaccagcatgaaagaactcctgcccgttctcgagcaggttgct
aaaatgggcaagcccctggttatcatcgctgaagacatcgaaggtgaagctctggctacc
ctcgtagttaacaaactgcgcggcaccctcaatgttgttgctgttaaggctcccggtttc
ggtgatcgccgcaaagcaatgctcgcagacatcgcagccctcaccggcggagcagttgtt
tccgacgacatcggtctcaacctcgaagctgttacccttgatcacctcggttccgcaaaa
cgcgttgtaatcgacaaggaaaacaccaccatcgtagacggtgcaggcgaaggcgaaatg
atcaaagcccgtatcggccagatccgcaacgaaatcgaactctccacttccgactacgac
cgtgaaaaacttcaggaacgcctcgccaagatcgttggcggtgtagcagttatcaacgtt
ggtgctgcaactgaaactgaaatgaaagaaaagaaagcacgcgtggaagatgcactcaac
gctacccgcgctgctgttgaagaaggtatcgttcccggtggtggtactgcacttatccgc
tgcatccctgctctggaaaacgtaacctcctccgacgatgacgaatccgcaggtatcgac
atcatccgtcgcgctatcgaagagcctctccgccagatcgctggcaacgcaggcctcgaa
ggttccatcgttgttgagaaagtaaaagaagcaaaagacggtaacggtttcaacgctgct
atcggcgaatacgaagacctgatcaaggccggtgttatcgaccccaaaaaagttacccgt
atcgctatccagaacgcagcttccgttgcaggcctcctgctgaccaccgaatgcgctatc
gctgaaaagcctgaaaaggctgcagacatgcctgctggtatgcccggcggtatgcccggc
atgggcggcatgggtggcatgggcggtatgggtggcatgggcggcatgtactaa
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