Devosia salina: K1X15_14715
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Entry
K1X15_14715 CDS
T07996
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
dsal
Devosia salina
Pathway
dsal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X15_14715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsal03019
]
K1X15_14715
Enzymes [BR:
dsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K1X15_14715
Messenger RNA biogenesis [BR:
dsal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K1X15_14715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QYO75872
UniProt:
A0ABX8WEJ0
LinkDB
All DBs
Position
complement(2994123..2995646)
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AA seq
507 aa
AA seq
DB search
MKTRQSHERRGARAVSRTTKDKSLTDFISLGLPTLITDSLTASGFTEPTKIQTQAIPKLI
EGRDMLGIAQTGSGKTAAFGLPILAGILGLTGRPRPMTTRALILAPTRELAVQIDENIRK
FAGSKMKLDTVLVLGGVSRYHQVQKIAKGVDVVVATPGRLKDLLDDNKIRLNETRWLVLD
EADRMLDMGFIAPVRAIAKAIGLKRQTMLFSATMAAEVEDLAKTLLKEPIKVEAAPQGST
VVKIDQRVIMSGSKAKRGVLNDLLADEKEGMERVIIFSRTKHGADRVAKNLAIDGHEAAA
IHGNKSQNARQAALKGFANGSVRILVATDIAARGIDVTGITHVVNYELPDDPENYVHRIG
RTGRNGASGIAITLCDGTEKGKLRDVERLIRRTLPVSGDVNLVEEAPAPRQPRNNAGAPA
GARSARNPKPNGQRKFNTPRPGGERGRGGAPHAAADGERNGQVKHVRRDPETGKPLGNKP
AGAKSGKPRWSKGQRDAGKARRASANA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacgcgccagtcgcatgagcggcgtggcgcacgcgcggtttcgcgcaccacgaaa
gacaaaagtttgaccgatttcatttcgctcggcctgccgaccctgatcaccgacagcctg
actgccagcggcttcaccgagcccaccaagatccagacccaggccatccccaagctcatc
gagggccgggacatgctgggcatcgcccagaccggctcgggcaagacggccgccttcggc
ctgccgatcctggccggcattctgggccttaccggccgtccccgccccatgaccacgcgc
gcgctgatcctggcgccgacgcgtgaactggcggtgcagatcgacgagaatatccgcaag
ttcgccggctccaagatgaagctcgacaccgtgctcgtgctgggcggggtgtcgcgctac
caccaggtgcagaagatcgccaagggtgtcgacgtcgtcgtggccaccccggggcgcctc
aaggacctgcttgacgacaacaagatccgcctcaacgaaacccgctggctggtgctggac
gaggccgaccgcatgctcgacatgggcttcatcgccccggtgcgcgccatcgccaaggcc
attggcctcaagcgccagaccatgctgttctcggccaccatggccgccgaggtcgaagac
ctggccaagaccctgctcaaggagccgatcaaggtcgaggcggcgccgcagggctccacc
gtggtcaagatcgaccagcgcgtgatcatgtccggctcgaaggccaagcgcggcgttctc
aatgacctgctcgccgacgagaaggaaggcatggagcgcgtcatcatcttctcgcgcacc
aagcatggcgccgaccgcgtggccaagaacctggccatcgacgggcacgaggccgccgcc
attcacggcaacaagagccagaatgcccggcaggcggccctcaagggctttgccaatggc
tcggtgcgcatcctcgtggcgaccgatatcgcggcgcgcggcatcgatgtgaccggcatc
acccatgtggtgaactacgaattgcctgacgatccggagaattatgtgcaccgcatcggc
cgcacgggccgcaacggcgcctcgggcattgccatcacgctgtgcgatggtaccgagaag
ggcaagctgcgcgatgtcgaacggctgatccggcgcaccctgccggtttccggtgacgtc
aatctggtcgaagaagcgcctgccccacgccagccgcgcaacaatgccggtgcgcccgcc
ggtgctcgttcggcgcgcaatcccaagcccaacgggcagcgcaagttcaatacgccacgt
ccgggcggcgagcgtggtcgtggcggcgcgccgcacgcggctgcggatggcgaacgcaat
ggccaggtcaagcatgtccgtcgcgaccccgaaacgggcaagccattgggcaacaagccc
gctggtgccaagagcggcaagccgcgctggtccaagggccagcgggacgccggcaaggcc
cggcgcgcttccgccaacgcctga
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