Devosia salina: K1X15_18565
Help
Entry
K1X15_18565 CDS
T07996
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
dsal
Devosia salina
Pathway
dsal02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsal00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K1X15_18565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsal03021
]
K1X15_18565
Transcription machinery [BR:
dsal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K1X15_18565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Ank_2
Ank_4
Ank
Ank_5
Sigma70_r3
Ank_3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QYO76566
UniProt:
A0ABX8WHW7
LinkDB
All DBs
Position
complement(3787528..3789666)
Genome browser
AA seq
712 aa
AA seq
DB search
MSSEMSPLFRLAIASGRAETVRSHLERGADPNARDNTGATALLLAASRGRQDICEILIDH
GADTSALDGTGRTVLDYATQWGFDLTIDDAAPIELSTDQAAAIQESGIADTSAGAKDSHP
VQQADALPVLSPAVEDPTEAPGTTAGTLLDAVALGLGLHEAEPSANEDDVQSSDGWEAEP
EFLSRPADDARIAAAEVAHETFSRPSAAVDASDWSQVAVALPVELGSASPQLPGPLRDLI
LDALRDGRIAASGLREGISRTKNGREYARPIRILLSDLGVTVDTSTLGAVLDAEAPAAQS
KEVEPGALEDAAEFLGSLLTNDPETAYLESIRALREDALGLQPILWARAEELRRRLAHVF
ARMPGGLELLEGAGALFAADQDEDTSEEEDSEEGPGEDEDEEAARNEAPVEDQHPNEESH
LATRYADLTPNELALELAGMRLRPTVFEDAARRARELRAEGFEDAIAFAAELRGRLNRIV
ETNLGLVAWVAKRYRNKGMEPLDLIQEGSIGLMKAVEKYDPDRGATLGTYATWWIRQSIT
RAMADLCRTIRVPVHLQERARKLERVRQELHSELGRPATATELAEEMEISLDALVRLQRL
TGTLVTRGNNVERLTREMTTGLVDPQANPEDAMWDGRTRQEIADQLLELTPREERVVRLR
FGIGMADELTLEQVGETFEVTRERIRQIEAKALRRLSHPSRTKRLKGALDVQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggagatgtcgccgctgttcaggctggcgatagcgtctggaagagcagagaca
gtacgatcgcaccttgagcggggtgcagatccgaatgcgcgcgacaacaccggtgcgacc
gctttgctgctggctgcatcacgcggccgtcaggacatctgcgagattctcatcgatcat
ggggcggacacttctgcgttggatggcacgggacgaacggtcctcgactacgccacgcaa
tggggtttcgacctgacgatcgatgatgcggccccaatagagctgtcgactgatcaggcc
gcggccattcaggaatccggcattgccgatacatctgccggcgccaaggactcccacccg
gtccagcaggcagacgctctccccgtcctctctccagcagtcgaagacccgacagaggct
cccggaacgactgcagggacgctgctcgacgctgtggccttggggctcgggctgcacgaa
gccgagccgtcagcaaacgaagacgacgttcaatcgtcggacggctgggaggcagagccg
gagttcctgtcccgcccggccgatgacgctcgtatcgcggccgcagaggtcgcgcatgaa
acgttctcgcgacccagcgcggcggtagacgccagtgactggtcgcaggtagccgtagcc
cttccagtcgagctcggctcagcatcgccgcagctgccgggaccgctgcgcgacctgatc
ctcgatgcgctgcgtgatggccgcattgccgccagcggtttgcgcgagggaatcagccga
acgaagaatggtcgcgagtacgctcgtccaatcagaattctgctgagcgacctcggcgtg
accgtggacacctccacattgggggcggtcctcgacgccgaggcacctgctgcgcagagc
aaagaagtcgagcctggtgcgctcgaggacgcagcggagttccttggttcgctgctcacc
aacgaccctgaaaccgcttacctcgagtccattcgggcacttagggaggatgcccttgga
cttcagcccattctgtgggcgcgcgccgaggagctgcgaagacgtctcgctcatgtcttt
gcccgaatgccgggtggtctggaactgctggagggagcgggtgcgctcttcgcggcagat
caggatgaagatacttcggaggaggaggactcagaagagggaccgggcgaggatgaggac
gaagaggctgcgcggaacgaagctcctgtggaggaccagcatccgaacgaggagagtcat
ctcgcaacaaggtatgcggacctgacacccaacgaactggcgctggaactggccggaatg
cgtctgagacccacggtgttcgaggacgcagcccgcagggcgcgcgagctgcgggcggag
gggttcgaggatgccattgcatttgccgccgagctgcgaggccggctgaacaggatcgtc
gagacaaaccttggcctcgtcgcctgggtggccaaacgataccggaacaagggcatggag
ccgctcgacctcattcaggagggaagcatcggtctgatgaaggcggtggagaagtacgat
ccggatcgaggcgccacccttggcacctatgcgacctggtggatacgacagtccatcact
cgggcgatggccgacctttgccgcacgatcagggtccccgttcatcttcaggagcgcgca
cgcaagctggagagagttcggcaggagcttcatagcgaacttgggcgtccggccaccgct
accgaactggcggaggagatggaaatctcgctcgatgcgcttgtcaggctccaaaggctg
acaggcactctcgtgacgcggggcaacaacgtcgagcggttgacgagggaaatgaccacg
ggcctcgtggatcctcaagccaacccggaggatgcgatgtgggacgggaggacgcgccag
gagatcgcggatcagttgctggaactgacaccgcgtgaggaaagggtcgttcggctgaga
tttggcattggcatggccgacgagctgaccctcgagcaggtcggcgagacattcgaagtc
acccgtgagcgcatccgtcagatcgaggccaaagcgttgcggcggttgtcgcaccccagc
aggaccaagaggctgaagggggcacttgatgtccagtga
DBGET
integrated database retrieval system
