Devosia salina: K1X15_20685
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Entry
K1X15_20685 CDS
T07996
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
dsal
Devosia salina
Brite
KEGG Orthology (KO) [BR:
dsal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsal03400
]
K1X15_20685 (addB)
Enzymes [BR:
dsal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K1X15_20685 (addB)
DNA repair and recombination proteins [BR:
dsal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K1X15_20685 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QYO76944
LinkDB
All DBs
Position
4199952..4202975
Genome browser
AA seq
1007 aa
AA seq
DB search
MSLYSIAPHTPFLPCLVEAVMDGRLLGGWDRSGPFWLSDVTIILPTRRAREALADAFAAH
PQFSGLLPDMRTFGGEVEDEEPFLPPFEAPALPASASRLQRRLKLSALVAGWASTVEGRA
AFSTPPTAAEIFSMADSLGTLIDDLIIEERSPADIRALGGEMAQELGNYWQQTLQFLDIA
LNAWPAWLRDQELADAASLRGLRLERQANALRFLFGDRPVIAAGSTGSIPATARLLKAIA
ELPRGAVVLPGLDMAMSPDMHEALLDPATNPHGHPQYGLAQLLRRFGAGVGQVTELCRSS
HPRTALVNLALAPTARTALWSEQRLPDAMVAEALAGVATIQARNEDEEARAIALAGRDAL
ERELTVGIVTPDRNLARRIAAELRRFDIVVDDAAGTPLFHASAGRLARQILNLASGNCAP
VDLLALLRNRATTLDGERGALVALADDIDLGLLRGQRPAPGMAGLRAMLAAHLAGKLKYP
ARKLTPARGAEIAALFDRLEAAIAPLLVLLQAPLLAASELAEALGQSLVALSPEAPLPGR
EAFQAWVEDMRTLAGQGHRFAPRGLEDVLAALMTGAEVRHRVPEDRRSDIAIWGQLEARL
MSPDLLVLASLNEDKWPGAADPGPWLSRGMRLGAGLEPPERMQGLAAHDFAQGLGNHQVI
LAYAERVGASPSLPSRLVQRLDAFVGEGAAQALRARGRVWIDQARQLDAVATVRPAARPA
PNPPVHARPRKLSVTEIETLMRSPYDLYAKHVLKLKPLDALGEDPDARERGTIIHAIFAR
FVDDNIDPAAPDAFNRLMAIAAEEFAGLEAIGERRDIWLRRFATAATQFLEFEQGRAHLV
AARHAEVSGRWDLRLVEPFTITGQADRVDRLANGTLEILDFKTGSPPSPGAMKAFEAPQL
PVEALMAVHGGFKDIAPADTSALTYIKIGLGPDAFRSSSFALPEGMSVMEVADAVFARMQ
AQIDYFLMHETPLPSRLLPVKAQRFAGAYDHLARVAEWTAVDGEDEP
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgagcctttattccatcgccccgcatacgcccttcctgccgtgcctcgtcgaggcggtg
atggatggacgcctgctggggggctgggaccggagcgggccattctggctgagcgacgtc
accatcatcctgcccacccgccgcgcccgcgaggcgctggccgacgcctttgccgcccat
ccccaattcagcggcctcctgcccgacatgcgcacctttggcggcgaagtggaggacgaa
gagcccttcctgccccccttcgaggccccggccctgccggcctcggccagccggttgcag
cggcggctgaaattgtccgccctggtggcgggctgggccagcacggtcgaggggcgcgcg
gccttttcgaccccgccgacggccgcggaaatcttctccatggccgattcgctgggcacg
ctgatcgacgacctgatcatcgaggagcgcagcccggccgatatccgcgccctgggcggc
gagatggcgcaggaactgggcaattactggcaacagacgctgcaattcctcgatatcgcg
ctgaatgcctggccggcctggctcagggaccaggagctggcggacgccgcgtccctgcgg
ggcctgaggctcgagcggcaggccaatgcgctccgcttcctcttcggcgaccggcccgtc
attgcggccggctcgaccggttcgattcccgccacggcccggctgctcaaggcgattgcc
gagctgccccggggcgccgtggtgctgcccgggctcgacatggccatgagcccggacatg
cacgaggcgctgctcgaccccgccaccaacccccatggccacccgcaatatggcctggcg
cagctcttgcgccgcttcggggccggcgtggggcaggtcaccgaactctgccgctccagc
cacccacgcaccgcgctggtcaacctggcgctcgcgcccaccgcccgcaccgcgctgtgg
tccgaacagcgcctgcccgatgcaatggtcgccgaggcgctggcgggcgtcgccaccatc
caggcccgcaatgaggacgaggaggcgcgtgccattgccctggccggtcgcgatgcgctg
gagcgggaactgaccgtgggcatcgttacgccggaccgcaatctggcccgccgcatcgcc
gccgaactgagacgcttcgacatcgtggtcgacgacgccgccggcacgcccctgttccac
gcgtcggccgggcgcctggcccggcagatcctcaacctcgccagtggcaattgcgcgccg
gtggacctcctggcgcttctgcgcaatcgggccaccacgctcgacggtgagcgcggcgcc
ctggtggccctcgccgacgacatcgatctggggctgttgcgcggccagcggccggccccg
ggcatggccggccttcgcgccatgctggcagcccatctcgccggaaaactgaaatatccg
gcccgcaagctgacgccggcccgtggcgccgaaatcgccgcgctgttcgaccgcctggaa
gccgcgatcgcgccgctcctcgtcctcctgcaggcgccgctcctggccgcgtccgagctg
gccgaggcgctgggccagagccttgttgccctcagcccggaggcgccgctgccgggccgg
gaggcgttccaggcctgggtcgaggacatgcggacgctcgcaggacagggacaccgattt
gccccccgcggcctcgaagacgtgctggcagcattgatgaccggcgccgaagtgcgccac
cgcgtgccggaggaccgacgcagcgacatcgctatctggggccagctcgaagcccggctg
atgagcccggacctgctggtgctggcgtcgctcaacgaggacaaatggccaggcgcggcc
gatcccggcccctggctcagccgcggcatgcggctcggcgccggtctcgaaccgccggag
cgcatgcagggactggccgcgcacgactttgcgcaagggctgggcaatcaccaggtgatc
ctggcctatgccgagcgggtgggtgccagtccgtccctgccctcgcgcctggtgcagcgg
ctcgatgcctttgtgggtgagggggccgcccaggcgctgcgcgcgcgggggcgcgtctgg
atcgaccaggcccgccagctcgacgccgtggcgacggttcggcccgccgcacggcccgca
cccaatccgcccgtccatgcgcgtccgcgcaaactctcggtgaccgagatcgagacgctg
atgcgctcgccctatgacctctatgccaagcacgtcctcaagttgaagccactcgatgcg
ctgggcgaggaccccgatgcgcgcgaacgcggcaccatcatccacgccattttcgcccgc
ttcgtcgacgacaatatcgacccggccgcgcccgacgcctttaaccggctgatggcgatt
gccgccgaggaatttgccgggctcgaagccattggcgagcgccgcgacatctggctgagg
cgcttcgccaccgcggccacgcaattcctggagttcgagcagggccgggcgcatctggtg
gctgctcgccatgccgaagtctccggccgctgggacctgcggctcgtcgagcccttcacc
atcaccggccaggccgaccgggtcgaccggctcgccaatgggacgcttgaaatcctcgat
ttcaagaccggctcgccgcccagcccgggcgccatgaaggccttcgaggcgccgcaattg
ccggtcgaagcgctgatggctgtccatggcgggttcaaggacatcgcccccgccgatacc
agtgcgctcacctatatcaagatcgggctggggcccgacgccttccgctccagcagcttt
gccctgcccgagggcatgagcgtgatggaggtggccgatgccgtgttcgcgcgcatgcag
gcccagatcgactatttcctgatgcacgaaaccccgctgccgtcgcggctgctgccggtc
aaggcccagcgctttgccggcgcctatgaccatctggcccgggtcgccgaatggacggcg
gtggacggggaggacgagccatga
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