Devosia salina: K1X15_20865
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Entry
K1X15_20865 CDS
T07996
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dsal
Devosia salina
Pathway
dsal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K1X15_20865 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsal03019
]
K1X15_20865 (pnp)
03016 Transfer RNA biogenesis [BR:
dsal03016
]
K1X15_20865 (pnp)
Enzymes [BR:
dsal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K1X15_20865 (pnp)
Messenger RNA biogenesis [BR:
dsal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K1X15_20865 (pnp)
Transfer RNA biogenesis [BR:
dsal03016
]
Prokaryotic type
tRNA degradation factors
K1X15_20865 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
aRib
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QYO76977
UniProt:
A0ABX8WE59
LinkDB
All DBs
Position
complement(4237538..4239682)
Genome browser
AA seq
714 aa
AA seq
DB search
MSIKFDHHKVELNWGGQPLTLETGKMARQADGAVLATLGETVVLATVVSAKSPKPGQDFF
PLTVNYQEKYFAAGKIPGGYFKREGRPTENETLTSRLIDRPIRPLFPDGYKNETQVIVTV
LQHDMENNPDVLAMVAASAALTISGVPFMGPIGAARVGYVDGEYVLNLPVDRRADSKLDL
VMAGTQDAVLMVESEAKELSEEVMLGAVMFGHKASAQVIEAIIKLAELAAKEPRDFTAPD
YSELEKEVLAIAEADLRAAYKLTDKAARYAAVDATNAKVKEAYAAKIEAGEVSKEDLGEV
VHNLQAKIVRWNILDTGSRIDGRDLKTVRPILAEVGVLPRTHGSAVFTRGETQALVVATL
GTAEDEQFIDSLEGTKKENFLLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAINPIRP
SMEEFPYTIRVVSEITESNGSSSMATVCGTSLALMDAGVPMKKPVAGIAMGLILEGEKFA
VLSDILGDEDHLGDMDFKVAGTEEGVTSLQMDIKIAGITEEIMKQALAQAKDGRIHILGE
MAKALSASRGEVGEFAPRIETLKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVK
VSSSDGSQIEAAIKWIRSITDEPEVNAIYQGTVVKTADFGAFVNFFGAKDGLVHISQLAD
QRVAKTTDVVKEGDKVWVKLLGFDERGKVRLSMKVVDQETGKEIAREAKDDAAE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaagtttgatcaccataaggtcgagctcaactggggcggccagcccctgacg
ctcgagaccggcaagatggcccgccaggccgatggcgccgtgctcgccaccctgggcgaa
accgtcgtgctcgccaccgttgtcagcgccaagtcgcccaagccgggccaggacttcttc
ccgctgaccgtcaactaccaggaaaaatacttcgccgccggcaagatcccgggcggctat
ttcaagcgcgaaggccgtccgaccgaaaacgagacgctgaccagccgcctgatcgaccgt
ccgatccgtccgctcttccccgatggctacaagaacgagacccaggtcatcgtcaccgtt
ctccagcatgacatggagaacaatccggacgtcctcgccatggtcgccgcctcggctgcg
ctgaccatttcgggcgtgcccttcatgggcccgatcggcgccgcccgcgtgggctatgtc
gatggcgaatacgtgctcaacctgccggtcgaccgccgcgccgacagcaagctcgacctc
gtcatggccggcacgcaggacgccgtgctgatggtggaatcggaagccaaggagctgtcc
gaagaggtgatgctgggcgccgtgatgttcggtcacaaggcttcggcccaggtgatcgag
gccatcatcaagctggccgagctggccgccaaggaaccgcgcgacttcaccgccccggac
tattccgagctcgaaaaggaagtcctcgccattgccgaggccgacctgcgcgctgcctac
aagctgaccgacaaggccgcccgctacgctgccgtcgacgctaccaatgccaaggtcaag
gaagcctacgctgccaagatcgaagccggcgaagtctccaaggaagacctgggcgaggtg
gtacacaacctccaggccaagatcgtgcgctggaacatcctggacaccggcagccgcatc
gacggccgtgatctcaagaccgtccgcccgatcctggccgaagtcggcgtcctgccgcgc
acccatggttcggctgtgttcacccgcggcgagacccaggcgctggtggtggccaccctc
ggtaccgccgaagacgagcagttcatcgactcgctggaaggcaccaagaaggaaaacttc
ctgctgcattacaacttcccgccctattcggtgggtgaagcgggccgcatgggttcgccc
ggccgccgtgaaatcggccatggcaagctcgcctggcgcgccatcaacccgatccgtcct
tcgatggaagagttcccctacacgatccgcgtggtctccgagatcaccgaatccaatggc
tcgagctcgatggcaaccgtctgcggcacttcgctggcgctgatggatgccggcgtgccg
atgaagaagccggtggccggtatcgccatgggcctgatcctggaaggcgagaagttcgcc
gttctttcggacatcctgggtgacgaagatcacctcggtgacatggacttcaaggtggcc
ggtacggaagagggcgtgacctcgctccagatggacatcaagatcgccggtatcaccgaa
gagatcatgaagcaggccctggcccaggccaaggacggccgcatccacattctgggtgaa
atggccaaggcgctgtcggcctcgcgtggcgaagtgggcgagttcgccccgcgcatcgag
accctcaagatcccgaccgacaagatccgcgaagtgatcggcaccggcggcaaggtcatc
cgcgaaatcgtggaaaagaccggcgccaaggtgaacatcgaggatgacggcaccgtcaag
gtctcgtcctcggacggctcgcagatcgaagccgccatcaagtggatccgctcgatcacc
gacgagccggaagtcaacgcgatctatcagggcaccgtggtcaagaccgccgatttcggc
gccttcgtcaacttcttcggcgccaaggatggcctcgtgcacatcagccagctggcagac
cagcgcgttgccaagaccaccgacgtggtcaaggaaggcgacaaggtctgggtcaagctg
ctcggctttgacgagcgcggcaaggtccgcctgtcgatgaaggtcgtcgaccaggagacc
ggcaaggagattgcccgggaagccaaggacgacgcggccgagtaa
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