Desulfovibrio subterraneus: LN040_00575
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Entry
LN040_00575 CDS
T08953
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN040_00575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsb03000
]
LN040_00575
Transcription factors [BR:
dsb03000
]
Prokaryotic type
Helix-turn-helix
Other families
LN040_00575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
GAF_2
AAA_5
DUF1269
Motif
Other DBs
NCBI-ProteinID:
WBF67638
LinkDB
All DBs
Position
124957..126507
Genome browser
AA seq
516 aa
AA seq
DB search
MNETSDSIKLTILAEIGSIIGRALRLESALHDILAILGTRLSMGHGSIVLLERDRGGVAS
CVSYDRTPRDQARRGWGGSDADIIRAVSKGQAFVIMEGQGTPLFLDGAVARRITRQKVAL
LGVPVFVHGREAGLLMVNRLFDSPLAMDADLAFLETVAGLVGQFVSLNDSVTEKVEALKR
ENAALRYRVSQDSQRTHMISRSPVMADVECLMEQAAASDTPVLLQGEDGVGRALLAGLIH
DFSERARQPFVRIDCRAFSRPQGRQNWNGGRAPSQDSITSHFVERMEAAHEGTACLENVT
LLPRDLQAKLLGVLQGQGIERPGTRLVRRVNVRVLALCGPDVAQLVQQGGVCPDLYDCLS
GRMVIHVPPLRERREDVEAILNHLIAKAAREYGRHLRFGMDALEVLRRYEWPGNVREMEA
VVESLVAMTDGGNISAGMLLPLLGAVEGARMGAKGGAVSPSLKDMERNEVVSALRRTGWI
QYRAAEVLGITARQMGYKIKKFGLENMVASERARAR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacatccgattccataaagctcacgatactggccgaaattggcagcatcatc
ggcagggcgctccggttggagagcgcattgcacgatattcttgccattctgggaacacgg
ctttccatgggacacggcagcatagttttgctggagcgtgaccggggaggcgtcgcttca
tgcgtatcctatgaccggaccccgcgcgatcaggcccgcagaggctggggcgggtcggat
gcagacatcatccgcgccgtgtccaaggggcaggcctttgtcatcatggaagggcaggga
actcccctgtttctggatggtgctgttgcccgtcgtataacacgtcagaaggtggcgctg
ctcggagtgcctgtgttcgttcacggtcgcgaagctgggcttctgatggtgaacaggctt
ttcgattctcctctcgcgatggatgcggaccttgcctttctggaaaccgtggccgggctt
gtagggcagtttgtcagcctgaacgactctgtgacggagaaggtggaggcgctgaagcgt
gaaaacgccgctctgcggtatcgcgtatcacaggattcgcagcgaacgcacatgatctcg
cgcagtccggtcatggcagatgtggagtgccttatggaacaggcggccgcttcggatacc
ccggtgctcctgcagggtgaggatggagtcgggcgtgctttgctggccggtcttatacat
gatttttccgaacgtgcacgccagccgttcgtccgcattgactgccgcgcgttttcccgt
ccgcaggggcgccagaactggaatggcggcagggcgccctcgcaggacagcattaccagc
cattttgtcgagcggatggaagctgcccatgaaggaaccgcatgcctggaaaatgtgaca
ttgctcccgcgtgacctgcaggccaagcttctgggtgtgttgcaggggcagggcatagag
cgccccggcacccgccttgtgcggcgtgtgaatgtgcgtgtgcttgccctgtgcgggcct
gatgtggcgcagcttgttcagcagggcggtgtttgtcccgatctgtacgattgcctttcc
ggcagaatggttattcatgttccgcctctgcgggagcgcagggaggatgtggaagccatt
ctgaatcatctcatcgcaaaggccgctcgggaatatggcaggcatctgcgtttcggcatg
gacgcacttgaggtgctgcgccgctacgagtggcccggcaatgtgcgggagatggaagca
gtggttgaaagccttgtggccatgaccgacggcggcaatataagcgcgggtatgctgctg
ccgcttctcggtgcggtggaaggtgcccgcatgggggccaaggggggggctgtcagccct
tcgctcaaggatatggaacgcaatgaagtggtgagcgcgcttcgccgcaccggctggatt
cagtaccgggcagcggaggtgttgggtataaccgcgcggcagatgggctacaagatcaag
aagttcggccttgagaacatggtagcctcggagcgggcccgcgcacgctga
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