KEGG   Desulfovibrio subterraneus: LN040_01625
Entry
LN040_01625       CDS       T08953                                 
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dsb  Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:dsb03110]
    LN040_01625 (clpB)
Chaperones and folding catalysts [BR:dsb03110]
 Heat shock proteins
  HSP100
   LN040_01625 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small AAA Clp_N AAA_5 AAA_22 AAA_16 AAA_14 Sigma54_activat nSTAND3 TniB ATPase_2 AAA_7 NACHT RNA_helicase AAA_18 AAA_3 ABC_tran Zeta_toxin AAA_24 T2SSE DUF815 NBD_SMAX1
Other DBs
NCBI-ProteinID: WBF67833
LinkDB
Position
368178..370775
AA seq 865 aa
MNLNQFTEKSQLAISEAQNVAIRLGHQQVDVEHLVQALVEQENGLVSRLLEQMGHKPKAY
LEALGKELRRRPSVSGPGVGPDSIYVTQRLNRMLVRAQDFAKRLQDEYVSVEHLFCAALD
EPATSEIGRVNKEFGLTQDKVLAALTHVRGAQRVTSPNPEDTYEALKKYGRDLVEEARKG
KLDPVIGRDAEIRRTIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILNGDVPESLKNK
SLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRILMFIDELHIIVGAGKTEGAMDA
SNLLKPMLARGELHCIGATTLDEYRKYIEKDPAFERRFQPIIVDEPSVEDTVSILRGLKE
RFEVHHGVRISDSAIVEAVTLSDRYIADRQLPDKAIDLIDEAAAMIRTEIDSLPSELDEA
NRKIMQLEIEREALRRESDEGSRERLRKLENELAGLRENQAALLSQWEREKGSINSERNL
KEEIERTRRAIEEAERNYDLNRAAELKYSTLLNLEKLLAESQVGEDKDGRLLKEEVHPED
IAEIVARWTGIPVSKLLEAEREKLLRLGEELHKRVVGQEEAVTAVAEAVLRSRAGLSDPN
RPIGSFIFLGPTGVGKTELCKTLAASLFDSEDNIVRLDMSEYMEKHTVARLIGAPPGYVG
YDEGGQLTEAVRRKQYSVVLFDEIEKAHPDVFNALLQILDDGRLTDSHGRTVNFKNTIII
MTSNIGAPIMLDGITEDGEFRPGVREEVLQELRTSFRPEFLNRVDETVLFRPLMLDQIKS
IVRLLMERIQGRLAERSIIVELDETAADHIARVAYDPVYGARPLRRYLQQHVETPLARMI
IAGELHDGGQVRIGLDNDQLVFNLL
NT seq 2598 nt   +upstreamnt  +downstreamnt
atgaatctgaaccaattcaccgaaaaatcacaacttgccatcagcgaggcgcagaacgtt
gccatccgtctgggacaccagcaggtggacgttgagcatcttgtgcaggcgctggtggag
caggagaacgggcttgtcagccgtctgctggaacagatggggcataagcccaaggcgtat
ctcgaggctctgggcaaggaattgcgcagacggccttctgtcagcggtcccggcgtgggg
ccggactccatctatgtcacacagcgtctgaaccgcatgctggtgcgggcgcaggatttt
gccaagcgcctgcaggacgaatacgtgagcgtggagcatctgttctgcgctgcacttgat
gagcctgcaaccagcgaaataggccgggtgaacaaggaattcggcctgacgcaggacaag
gtgctcgcagccctgacgcatgtgcgcggtgcgcagcgtgttacttcgcccaatcctgaa
gacacatatgaagcgctcaagaaatacgggcgtgaccttgtggaagaagcccgcaagggc
aagctggatcccgtgatcggccgtgatgcggaaattcgccgtaccatccgcattctgtcc
cgccgtaccaagaacaatcctgttctgatcggtgaggcaggcgtgggcaaaaccgccatc
gtggaaggactggcacaccgcatactcaatggtgacgtgccggaaagtctgaagaacaag
agcctctttgcgctggatatgggggcgcttattgcgggcgccaagtatcgcggcgagttt
gaagaacgcctcaaggccgtgctcaaggaagtggaaaaggccgaaggccggattctcatg
tttatcgacgagctgcatatcatcgtcggtgcgggcaagactgaaggagccatggatgca
agcaacctgctcaagcccatgctggcacggggcgagctgcactgcataggcgcaaccacg
ctggatgagtaccgcaagtacattgaaaaagaccccgcattcgaacgccggttccagccc
attattgtggacgaacccagcgtggaggatacggtttccattctgcgcggtctgaaagag
cgttttgaggtgcaccatggcgtgcgcataagcgactccgccattgtggaagccgtcacc
ctgtcggacaggtatattgccgacaggcagctgccggacaaggccattgacctgattgac
gaagccgccgccatgatccggacagagatagattcgcttccgtccgaacttgacgaggcg
aaccgcaagatcatgcagcttgagatagaaagagaagcactgcgccgcgagagcgacgag
ggctcccgtgaacgtctgcgcaagctggaaaacgaacttgcagggctgcgggaaaatcag
gctgcgctgctgtcacagtgggaacgcgaaaaggggtccatcaattccgaacgcaatctc
aaggaagagattgaacgcacccgtcgcgccattgaagaggctgaacgtaattatgacctg
aaccgtgccgccgaactcaagtattccacactgctgaatcttgagaagctgcttgcggaa
tctcaggtcggagaagacaaggacggcaggcttctcaaggaagaagtgcatccggaagac
attgccgaaatcgtggcgcgctggacgggtattcccgtttccaaactgcttgaagccgag
cgggaaaagctgctgcgtctcggggaagagctgcataagcgggttgtcgggcaggaagag
gccgttaccgctgtggcggaagccgtgctgcggtccagagccggactttccgaccccaac
aggcccataggttccttcatcttccttggtcccacgggcgtcggcaagactgaactgtgc
aaaacgctggcagcttcgctctttgattcggaagataacatcgtgcgtctcgacatgagc
gaatatatggaaaagcacacggtggcgcggcttatcggtgcgcctcccggctacgtcggc
tatgatgaaggcggccagctgactgaggccgtgcgccgcaagcaatatagcgtggtgctc
tttgacgaaatagaaaaggcgcatcccgatgtgttcaacgcgctgctccagattctggat
gacgggcgtctgacggacagtcatggccggacggtgaacttcaagaacaccatcatcatc
atgacatccaacatcggggctccgatcatgctggacggcataaccgaagatggcgagttc
aggcccggtgtccgggaagaggttctgcaggagctcagaacaagtttcaggccggaattc
ctgaaccgtgttgatgaaacggtactgttcagaccgctcatgctcgatcagatcaagagc
attgtccggcttctcatggagcgcatacaaggtcgtcttgccgagcgttccatcattgtc
gagctggatgagaccgcggccgatcatatcgcaagggtagcgtacgaccccgtatacgga
gcccgtccactgcggcgttatctgcagcaacacgtggaaacgcctcttgcccggatgatc
attgcgggagagctgcatgacgggggacaggtgcgtataggtttggacaacgaccaactt
gtgttcaatctgctgtaa

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