Desulfovibrio subterraneus: LN040_01625
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Entry
LN040_01625 CDS
T08953
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
dsb03110
]
LN040_01625 (clpB)
Chaperones and folding catalysts [BR:
dsb03110
]
Heat shock proteins
HSP100
LN040_01625 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
AAA_14
Sigma54_activat
nSTAND3
TniB
ATPase_2
AAA_7
NACHT
RNA_helicase
AAA_18
AAA_3
ABC_tran
Zeta_toxin
AAA_24
T2SSE
DUF815
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
WBF67833
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Position
368178..370775
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AA seq
865 aa
AA seq
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MNLNQFTEKSQLAISEAQNVAIRLGHQQVDVEHLVQALVEQENGLVSRLLEQMGHKPKAY
LEALGKELRRRPSVSGPGVGPDSIYVTQRLNRMLVRAQDFAKRLQDEYVSVEHLFCAALD
EPATSEIGRVNKEFGLTQDKVLAALTHVRGAQRVTSPNPEDTYEALKKYGRDLVEEARKG
KLDPVIGRDAEIRRTIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILNGDVPESLKNK
SLFALDMGALIAGAKYRGEFEERLKAVLKEVEKAEGRILMFIDELHIIVGAGKTEGAMDA
SNLLKPMLARGELHCIGATTLDEYRKYIEKDPAFERRFQPIIVDEPSVEDTVSILRGLKE
RFEVHHGVRISDSAIVEAVTLSDRYIADRQLPDKAIDLIDEAAAMIRTEIDSLPSELDEA
NRKIMQLEIEREALRRESDEGSRERLRKLENELAGLRENQAALLSQWEREKGSINSERNL
KEEIERTRRAIEEAERNYDLNRAAELKYSTLLNLEKLLAESQVGEDKDGRLLKEEVHPED
IAEIVARWTGIPVSKLLEAEREKLLRLGEELHKRVVGQEEAVTAVAEAVLRSRAGLSDPN
RPIGSFIFLGPTGVGKTELCKTLAASLFDSEDNIVRLDMSEYMEKHTVARLIGAPPGYVG
YDEGGQLTEAVRRKQYSVVLFDEIEKAHPDVFNALLQILDDGRLTDSHGRTVNFKNTIII
MTSNIGAPIMLDGITEDGEFRPGVREEVLQELRTSFRPEFLNRVDETVLFRPLMLDQIKS
IVRLLMERIQGRLAERSIIVELDETAADHIARVAYDPVYGARPLRRYLQQHVETPLARMI
IAGELHDGGQVRIGLDNDQLVFNLL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaccaattcaccgaaaaatcacaacttgccatcagcgaggcgcagaacgtt
gccatccgtctgggacaccagcaggtggacgttgagcatcttgtgcaggcgctggtggag
caggagaacgggcttgtcagccgtctgctggaacagatggggcataagcccaaggcgtat
ctcgaggctctgggcaaggaattgcgcagacggccttctgtcagcggtcccggcgtgggg
ccggactccatctatgtcacacagcgtctgaaccgcatgctggtgcgggcgcaggatttt
gccaagcgcctgcaggacgaatacgtgagcgtggagcatctgttctgcgctgcacttgat
gagcctgcaaccagcgaaataggccgggtgaacaaggaattcggcctgacgcaggacaag
gtgctcgcagccctgacgcatgtgcgcggtgcgcagcgtgttacttcgcccaatcctgaa
gacacatatgaagcgctcaagaaatacgggcgtgaccttgtggaagaagcccgcaagggc
aagctggatcccgtgatcggccgtgatgcggaaattcgccgtaccatccgcattctgtcc
cgccgtaccaagaacaatcctgttctgatcggtgaggcaggcgtgggcaaaaccgccatc
gtggaaggactggcacaccgcatactcaatggtgacgtgccggaaagtctgaagaacaag
agcctctttgcgctggatatgggggcgcttattgcgggcgccaagtatcgcggcgagttt
gaagaacgcctcaaggccgtgctcaaggaagtggaaaaggccgaaggccggattctcatg
tttatcgacgagctgcatatcatcgtcggtgcgggcaagactgaaggagccatggatgca
agcaacctgctcaagcccatgctggcacggggcgagctgcactgcataggcgcaaccacg
ctggatgagtaccgcaagtacattgaaaaagaccccgcattcgaacgccggttccagccc
attattgtggacgaacccagcgtggaggatacggtttccattctgcgcggtctgaaagag
cgttttgaggtgcaccatggcgtgcgcataagcgactccgccattgtggaagccgtcacc
ctgtcggacaggtatattgccgacaggcagctgccggacaaggccattgacctgattgac
gaagccgccgccatgatccggacagagatagattcgcttccgtccgaacttgacgaggcg
aaccgcaagatcatgcagcttgagatagaaagagaagcactgcgccgcgagagcgacgag
ggctcccgtgaacgtctgcgcaagctggaaaacgaacttgcagggctgcgggaaaatcag
gctgcgctgctgtcacagtgggaacgcgaaaaggggtccatcaattccgaacgcaatctc
aaggaagagattgaacgcacccgtcgcgccattgaagaggctgaacgtaattatgacctg
aaccgtgccgccgaactcaagtattccacactgctgaatcttgagaagctgcttgcggaa
tctcaggtcggagaagacaaggacggcaggcttctcaaggaagaagtgcatccggaagac
attgccgaaatcgtggcgcgctggacgggtattcccgtttccaaactgcttgaagccgag
cgggaaaagctgctgcgtctcggggaagagctgcataagcgggttgtcgggcaggaagag
gccgttaccgctgtggcggaagccgtgctgcggtccagagccggactttccgaccccaac
aggcccataggttccttcatcttccttggtcccacgggcgtcggcaagactgaactgtgc
aaaacgctggcagcttcgctctttgattcggaagataacatcgtgcgtctcgacatgagc
gaatatatggaaaagcacacggtggcgcggcttatcggtgcgcctcccggctacgtcggc
tatgatgaaggcggccagctgactgaggccgtgcgccgcaagcaatatagcgtggtgctc
tttgacgaaatagaaaaggcgcatcccgatgtgttcaacgcgctgctccagattctggat
gacgggcgtctgacggacagtcatggccggacggtgaacttcaagaacaccatcatcatc
atgacatccaacatcggggctccgatcatgctggacggcataaccgaagatggcgagttc
aggcccggtgtccgggaagaggttctgcaggagctcagaacaagtttcaggccggaattc
ctgaaccgtgttgatgaaacggtactgttcagaccgctcatgctcgatcagatcaagagc
attgtccggcttctcatggagcgcatacaaggtcgtcttgccgagcgttccatcattgtc
gagctggatgagaccgcggccgatcatatcgcaagggtagcgtacgaccccgtatacgga
gcccgtccactgcggcgttatctgcagcaacacgtggaaacgcctcttgcccggatgatc
attgcgggagagctgcatgacgggggacaggtgcgtataggtttggacaacgaccaactt
gtgttcaatctgctgtaa
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