KEGG   Desulfovibrio subterraneus: LN040_02105
Entry
LN040_02105       CDS       T08953                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
dsb  Desulfovibrio subterraneus
Pathway
dsb00300  Lysine biosynthesis
dsb00470  D-Amino acid metabolism
dsb01100  Metabolic pathways
dsb01110  Biosynthesis of secondary metabolites
dsb01120  Microbial metabolism in diverse environments
dsb01230  Biosynthesis of amino acids
Module
dsb_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:dsb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LN040_02105 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LN040_02105 (dapF)
Enzymes [BR:dsb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LN040_02105 (dapF)
SSDB
Motif
Pfam: DAP_epimerase SPO11_like
Other DBs
NCBI-ProteinID: WBF69270
LinkDB
Position
complement(480648..481481)
AA seq 277 aa
MNAVPIHKMQGCGNDFVFIDNRKLALPVSAMADWAKKVCRRAFGVGADGLVFLEEAPDAS
VDYRWHFYNADGSRAEMCGNASRCAGLLAVKLGFAGPVHTFGSDAGPIRAEVDVENCEVK
VQLTPPKGLELNKSVDMPGLEGTIHFVNTGVPHAVYIHDDAAGLNVKTLGAHVRYHAAFA
PAGTNANFVTVLDRNSIHLRTYERGVEDETYACGTGAAAGVVVTNALGLTESSVNVRSSG
GEILGISIENGCVHLKGKALNVYSGEMYLEALGLTLP
NT seq 834 nt   +upstreamnt  +downstreamnt
atgaatgcagtccccatccataagatgcagggctgcggcaacgacttcgtgttcattgac
aacagaaagcttgcgctgcccgtgtcagccatggcggactgggcaaaaaaagtctgtcgc
cgcgcctttggcgtcggagcagacggccttgtctttcttgaagaggctcccgatgcctca
gttgattaccgctggcatttctacaacgcagacggttcccgggcagaaatgtgcggcaat
gcatcgcgttgcgccggtctgctggcagtaaagctgggatttgccggtccggtgcacacc
ttcgggtccgacgcaggccccatccgtgctgaggtggatgtcgagaactgcgaggtaaag
gtacagctcaccccgcccaagggacttgaactgaacaagtccgtcgatatgcccggtctt
gaaggtaccattcacttcgtgaacactggtgtaccgcacgccgtttacatccatgacgat
gcggcaggtctgaacgtgaaaacccttggtgcgcatgtccgctatcacgcggcattcgcc
cctgccggaaccaacgcgaactttgtgaccgtgctggacaggaatagcattcatctgcgc
acctacgaacgcggcgtggaagacgaaacctatgcctgcggcactggtgccgcggcaggt
gtggttgtcaccaacgctctgggacttacggaatcatccgtcaatgtccgcagctcaggc
ggtgaaatactcggcatatccattgaaaatggatgcgtccacctcaagggcaaggcgctg
aacgtctattccggtgaaatgtatcttgaggctctcggcctcaccctaccctaa

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