Desulfovibrio subterraneus: LN040_02105
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Entry
LN040_02105 CDS
T08953
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00300
Lysine biosynthesis
dsb00470
D-Amino acid metabolism
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
dsb01120
Microbial metabolism in diverse environments
dsb01230
Biosynthesis of amino acids
Module
dsb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LN040_02105 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LN040_02105 (dapF)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LN040_02105 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
SPO11_like
Motif
Other DBs
NCBI-ProteinID:
WBF69270
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Position
complement(480648..481481)
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AA seq
277 aa
AA seq
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MNAVPIHKMQGCGNDFVFIDNRKLALPVSAMADWAKKVCRRAFGVGADGLVFLEEAPDAS
VDYRWHFYNADGSRAEMCGNASRCAGLLAVKLGFAGPVHTFGSDAGPIRAEVDVENCEVK
VQLTPPKGLELNKSVDMPGLEGTIHFVNTGVPHAVYIHDDAAGLNVKTLGAHVRYHAAFA
PAGTNANFVTVLDRNSIHLRTYERGVEDETYACGTGAAAGVVVTNALGLTESSVNVRSSG
GEILGISIENGCVHLKGKALNVYSGEMYLEALGLTLP
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagtccccatccataagatgcagggctgcggcaacgacttcgtgttcattgac
aacagaaagcttgcgctgcccgtgtcagccatggcggactgggcaaaaaaagtctgtcgc
cgcgcctttggcgtcggagcagacggccttgtctttcttgaagaggctcccgatgcctca
gttgattaccgctggcatttctacaacgcagacggttcccgggcagaaatgtgcggcaat
gcatcgcgttgcgccggtctgctggcagtaaagctgggatttgccggtccggtgcacacc
ttcgggtccgacgcaggccccatccgtgctgaggtggatgtcgagaactgcgaggtaaag
gtacagctcaccccgcccaagggacttgaactgaacaagtccgtcgatatgcccggtctt
gaaggtaccattcacttcgtgaacactggtgtaccgcacgccgtttacatccatgacgat
gcggcaggtctgaacgtgaaaacccttggtgcgcatgtccgctatcacgcggcattcgcc
cctgccggaaccaacgcgaactttgtgaccgtgctggacaggaatagcattcatctgcgc
acctacgaacgcggcgtggaagacgaaacctatgcctgcggcactggtgccgcggcaggt
gtggttgtcaccaacgctctgggacttacggaatcatccgtcaatgtccgcagctcaggc
ggtgaaatactcggcatatccattgaaaatggatgcgtccacctcaagggcaaggcgctg
aacgtctattccggtgaaatgtatcttgaggctctcggcctcaccctaccctaa
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