Desulfovibrio subterraneus: LN040_02360
Help
Entry
LN040_02360 CDS
T08953
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00541
Biosynthesis of various nucleotide sugars
dsb01100
Metabolic pathways
dsb01250
Biosynthesis of nucleotide sugars
Module
dsb_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN040_02360 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dsb01005
]
LN040_02360 (kdsA)
Enzymes [BR:
dsb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
LN040_02360 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
dsb01005
]
Lipid A
LN040_02360 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WBF67974
LinkDB
All DBs
Position
531940..532761
Genome browser
AA seq
273 aa
AA seq
DB search
MYAQLAKPLYDSFVSGPFVFAGPCALESFELALETAHAVKEAASACGLTAVFKSSYDKAN
RTSLSSFRGPGISKGLEWLTRIKEETGLPVVTDIHEPEQAAPVAEVADILQIPAFLCRQT
SLLLAAAQTGRIINVKKGQFVAPWDMKPALDKLFSTGNRCILLTERGASFGYNNLVVDFR
SLPIMQSFGVPVVFDATHSVQLPGGQGGCSGGDRQYVPKLARAAVAAGVNGVFLECHPDP
DKALCDGPNSWPLEKLAPLLKDLSTIWNIDYAC
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcacagttagctaagccattgtacgattcgttcgtttccggcccctttgtgttc
gcaggcccctgcgcactggagagtttcgaactggctcttgaaaccgcccatgcggtgaag
gaagctgcttcagcctgcggcctgaccgccgttttcaaaagctcttatgacaaggcgaac
agaacctccctgagcagtttcagagggcccggcatttccaaggggcttgagtggctcacc
cgcatcaaggaagaaacaggtctgccggtcgtaaccgacatacatgaaccggaacaggcg
gctcctgttgctgaagtggctgatattctgcagattcccgcctttctctgccgtcagaca
agcctgcttcttgcagcagcgcagaccggccgtataatcaacgtaaagaaagggcagttc
gtggccccatgggacatgaagcccgcactggacaagcttttctccacgggcaaccgttgt
atcctgctgacagaacggggagcctcgttcgggtataataatcttgttgtcgatttccgc
tccctccccatcatgcagtcgttcggtgtccccgttgtttttgacgccacccattctgtt
cagttgccgggcgggcagggcggttgctcgggcggagacaggcagtacgttcccaagctg
gcccgcgctgccgttgccgcaggggtaaacggtgtattcctcgaatgccaccccgatccg
gacaaggctctttgcgacggccccaacagctggccgctggaaaagcttgctccgctgctc
aaagacctctccaccatatggaacatagattatgcatgctga
DBGET
integrated database retrieval system
