Desulfovibrio subterraneus: LN040_02560
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Entry
LN040_02560 CDS
T08953
Name
(GenBank) ABC transporter ATP-binding protein/permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LN040_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_02560
Enzymes [BR:
dsb01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
LN040_02560
Transporters [BR:
dsb02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LN040_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_16
ABC_ATPase
DEAD
Cytidylate_kin
AAA_24
AAA_25
AAA_29
RsgA_GTPase
DUF87
SRP54
ATP-synt_ab
nSTAND1
ATP_bind_1
DUF3584
DO-GTPase2
AAA_23
Motif
Other DBs
NCBI-ProteinID:
WBF68010
LinkDB
All DBs
Position
571704..573521
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AA seq
605 aa
AA seq
DB search
MSELAKYDKKSEHVKSLPLLKRCLGYFKPYSRRITIAIIAMLMVSAAEGGTAYIVKPAFD
DGLNGKDMSSLMFVAFAAVGIFSVKAAGRYVQNYLMRYSALKVLEQLRNELYDRMIFLPM
KFFEREQVGNLMSRIIQDVILIRSSLPSVVMMARELITMVALIGVVFYQDWYLAIWAVLV
LPVAILPIAFFGRKLRKLGRKNQVKLADISVFLQEVFSGIRVVKAFHTERKEGENFRKEN
GRLVKIAVKEVVYSELSSPVMDVVGAIGAGAVLVAGGMRVIEGHMTVGGLMSFLAALGLL
YAPVKKFSSANLDVQRALAGAERVFEILDSTEIVEEKDGTVPFEPPLKEVEFRNVSFAYD
GCEAPALDNVSFTVRAGERVAIVGPSGAGKTTFVNLIPRFYEQQQGQILINGLDVRDYTL
ATLRRNIAMVSQDAFLFNISVRENIAYGQASISEDDVRAAARAAYANDFIEALPDGYDSV
VGERGTKLSGGQKQRLTIARAILKNAPLLILDEATSALDSESERIVQKALENLMAERTSI
VIAHRLSTVLSADRILVMDHGRIISQGRHEELLGTCQLYTKLYAMQFNTPESVEPATCPM
VEELA
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaattggcgaaatatgacaaaaaaagtgaacatgtaaagagccttcctcttctc
aaacgctgcctggggtacttcaaaccctactcacgcaggattaccatagccataatagcc
atgcttatggtttccgccgcagaaggtggcacggcatacatcgtcaagcccgccttcgac
gatgggctgaacggcaaggatatgagttcactcatgtttgtcgcttttgcggctgtgggc
atcttctccgtaaaagccgcaggacgatatgttcagaactacctcatgcgttacagcgcc
cttaaggtgctggagcaactgcgtaacgaactctacgacagaatgatctttctgcccatg
aagttctttgagcgggaacaggtaggcaacctcatgtcgcgcatcattcaggacgtcatt
ctcatccgttccagccttccctccgttgtcatgatggcgcgggaactcatcaccatggtg
gcgctgatcggcgtcgtgttctatcaggactggtatctggccatatgggccgttctggtg
ctgccggtggccattcttcctatcgcattcttcggtcgcaagctccgtaagcttggccgc
aagaatcaggtcaagctggccgacatttccgtcttcctgcaggaagttttcagcggcatc
cgcgtggtgaaagctttccataccgaacgcaaggaaggggagaacttccgcaaggaaaac
ggccgcctcgtcaagatagccgtcaaggaagtcgtctacagtgaactgtcttcacctgtc
atggacgttgtcggcgccattggtgccggtgccgtgctcgttgcgggcggtatgcgtgta
attgaaggccatatgaccgtgggggggcttatgtccttccttgctgcactcggcttgctt
tatgctcccgtgaaaaaattcagttccgcaaaccttgacgttcaacgtgctcttgcaggt
gccgaacgagttttcgaaatcctcgactccactgaaattgttgaagaaaaagacggaacc
gttccctttgaaccgccgttgaaagaagtggagttccgcaacgtttcttttgcctacgac
ggctgcgaagccccggctctggataacgtgagctttacagtccgtgccggtgaaagggtg
gccattgtcggtcccagcggagcaggcaaaaccacattcgtcaacctcattccccgcttt
tatgaacagcagcaggggcagattctcatcaacgggctggatgtgcgcgattacacgctt
gcaaccctgcgcaggaatattgccatggtttcgcaggacgccttcctgttcaacatctcc
gtccgcgagaacatcgcctacggacaggcgagcatttccgaggatgatgtccgtgcagca
gcccgtgcggcatacgcgaatgactttatcgaagcactgcccgacgggtacgactcggta
gtaggcgaacgcggcaccaagctttccggcggacagaagcagaggctgaccattgcccgt
gccatcctcaagaacgctcccttgcttattcttgatgaagcgaccagcgcgctggattcc
gaatccgaacgcatagtgcagaaggctcttgaaaacctgatggcagagcgcacaagcatt
gtcatagcccacaggctttctaccgtgctttccgcagacaggattctggtgatggatcac
ggcagaatcatctcgcagggacggcatgaagaattgctggggacttgtcagctctataca
aaactgtatgcaatgcagttcaacactccggaatccgtcgaaccagccacctgccccatg
gtagaggagctcgcgtaa
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