Desulfovibrio subterraneus: LN040_02615
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Entry
LN040_02615 CDS
T08953
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsb03036
]
LN040_02615 (xerD)
Chromosome and associated proteins [BR:
dsb03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LN040_02615 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
WBF68021
LinkDB
All DBs
Position
583512..584423
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AA seq
303 aa
AA seq
DB search
MTQAPTTPTTHPLVDSYLQHLLVTRGLSENTIASYATDMESFLIFLQEKRFQLESVTDQS
LFLYVMYLRRRGLNSRSLARHLSALRGFFAYCLEERVLSDNPVQYLENPKLPKTLPDVLS
QEEVAAILAQPILKTKLGFRDRTMLELLYAAGLRVSELISLAPVDFDAQTGLVRVFGKGG
KERIVPVHEAAAKFLDIYLRDWRPAFSPVQNFVFLNRSGKKLTRQAVWKNIQRYVQEAGI
RKSVSPHTFRHSFATHLLDGGADLRTVQLLLGHTDIAATEIYTHVQADRLRQVHRKYHPR
SRM
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggcacccaccactcccaccacgcatccgcttgtggacagctatcttcaacat
cttctcgtaacccgcgggttgtccgaaaacaccattgcctcgtacgccacggatatggaa
agctttctgatctttcttcaggagaaacgcttccagcttgagtccgtgacagaccaatca
ctatttctctatgtcatgtatctgcgcaggcgcggacttaacagccgcagtcttgcgcga
catctttccgccttgcgcggctttttcgcctactgccttgaagaacgggtgttaagcgac
aatccggttcagtaccttgagaacccgaagctgcccaagaccctgccggatgtactctcg
caggaagaggtagcagccattctcgcccagccaattctcaaaaccaaacttggattccgc
gacagaaccatgctggaactgctgtatgcagcgggcctgcgcgtttccgaactcatctcg
cttgcgcctgtcgatttcgacgcgcaaaccggccttgtccgcgtcttcggcaaggggggc
aaggagcgcattgttcctgtacacgaagcggccgcaaaattccttgatatctacctgcgg
gactggcggccggccttttctcccgtccagaacttcgtctttctgaaccgttcaggcaaa
aagctcacgcgccaggcggtgtggaaaaacattcagcgttacgtgcaggaagccggaatc
cgcaaaagcgtttcaccgcacaccttccgccattcctttgccacgcacctgctggacggc
ggcgcggacctgcgaacggtgcagttgctgctcggtcatactgatatcgcggctacagaa
atctacacgcatgtacaggccgacaggctccggcaggtgcaccgcaaataccacccccga
tcaaggatgtag
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