Desulfovibrio subterraneus: LN040_02650
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Entry
LN040_02650 CDS
T08953
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00300
Lysine biosynthesis
dsb00470
D-Amino acid metabolism
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
dsb01120
Microbial metabolism in diverse environments
dsb01230
Biosynthesis of amino acids
Module
dsb_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LN040_02650 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LN040_02650 (lysA)
Enzymes [BR:
dsb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LN040_02650 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PepSY
DUF6003
Motif
Other DBs
NCBI-ProteinID:
WBF68028
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Position
592916..594163
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AA seq
415 aa
AA seq
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MHHFEYRNGELHAENVPVRKLAQEYGTPLYVYSSATFTHHFKAFDSAFEGIQHLTCYSVK
ACSNINILKLLGSLGAGMDIVSGGELHRALKAGVPAERIVYSGVGKKHTEIREALEAGIL
MFNVESKQELERIASVARELNKVARISLRVNPDVDPKTHPYISTGLKKNKFGLDIEQSLA
TYRRAGELKGVEPIGIDCHIGSQLTSIEPFLEALDRVMKFYETLKAEGINIRYLDLGGGL
GIPYNTEEPPHPVEYGRAVTERLKGTGLTLILEPGRVIAGNSGILVTEVVYTKDTPSKHF
VIVDAAMNDLVRPSLYQSFHRIAEVVPQGREQRDVDVVGPICESGDFLAQDRTIPAVEQG
ELLALFSAGAYGFSMSSQYNSRLRAAEVMVDGDTVKVIRKRETYADLTALEEGSL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcatcattttgaataccgtaacggggaacttcatgccgaaaacgtgcccgtacgcaag
cttgcgcaggaatatggcacgccgctgtatgtgtattcctcggcaacgttcacgcatcac
ttcaaggcgttcgattccgcctttgaaggcattcagcaccttacctgctattcggtgaag
gcatgctccaacatcaacatcctcaagctgctcggctcgctcggcgcaggcatggatatt
gtttcaggtggcgaactgcaccgggcgctcaaggccggagtccccgctgaacgcattgtg
tattcgggtgtgggaaaaaagcacacggaaatacgcgaagcgctggaagccggaatcctg
atgttcaatgtggaatcgaagcaggaacttgagcgcattgcctccgttgcccgcgagttg
aacaaggttgcccgcatttccctgcgtgtgaacccggatgtggaccccaaaacgcatccc
tacatctccactggactcaaaaagaacaaattcgggcttgatattgaacagtcgctggcg
acctatcgcagagccggcgagcttaaaggtgtcgagcccataggcatcgactgccacata
ggttcacagctgaccagcatcgagccttttctcgaagcgctggacagggtcatgaaattc
tacgaaaccctcaaggccgagggtataaacatccgttacctcgaccttggcggcgggctt
ggcattccctacaatacggaagagccgccccaccctgtagaatatggcagagccgtcacg
gaacgcctcaagggaaccggacttacgcttattcttgaacccggccgcgtcatcgccggt
aactccggcatactggtaaccgaggttgtgtacaccaaggatactcccagcaagcatttc
gtcatcgtggatgccgccatgaacgatctggtgcgtccctccctgtatcagtctttccat
cgcattgcggaagttgttccgcagggacgggagcagcgggatgtagatgtggtcggcccc
atctgcgaatcaggcgactttcttgcgcaggacagaaccatccccgccgtggagcaaggg
gaactgctcgccctgttctctgcaggggcgtatggcttttccatgagttcgcaatacaac
tcccgcctgcgtgccgcagaggtgatggtggatggtgataccgtcaaggtcatccgcaag
cgcgaaacgtatgcggacctcactgcgctggaagaaggaagcctgtga
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