Desulfovibrio subterraneus: LN040_03445
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Entry
LN040_03445 CDS
T08953
Name
(GenBank) SNF2 family helicase
Organism
dsb
Desulfovibrio subterraneus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SNF2_assoc
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
SWIM
Motif
Other DBs
NCBI-ProteinID:
WBF68174
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Position
765667..768870
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AA seq
1067 aa
AA seq
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MDEASARRLLNTLVEDTIPEYIIDGSRYILESGGVQKISLKKSEGYWDIEGTVQGEDFQI
YSPKLNVDFEEDSVNYMCNCPEAFSGACRHVGAAAIKFLATLETKPGDDAEPQKPKTDWR
QNFRAFFSTDIEPEAGRHYLIYRFHPEPGRLQVSFFRARQNKSGLSTVHNEVTLEQIIEN
PDWCELSPKLPIVAQQIGRYNDYFGHRVEVPDGLLTWFLWTVRREYYLFWKDTDSPCRVE
IGTMDLKLKPQLTEEGLTFDVMIRSEGKPPQSIVDSEVTFHGQIPLWVCWNKGFYPVYTS
LNSSLVQDLALQPPVIEKEDIPEFLDRVWTQLPATDLFGQEEFLKHMEPIFIPATYNPKL
FLDEEGSLLTLEIQNLYETVHGEFLLPGPNPSFMTGSYSFEGSTYLIRRMQEEEANLTDL
LLSMNFQPRNNRVWFLEPEEAITFLLDAYPKLVEQYRVYGEKALSKYKVRLTTPAITATV
ESNEDEKWFSLEIEVEYDGQRVPIDTIWKAWVQGKRYVQLKDGSYTSLPESWLEKIAHKL
RAMGLDAEKPPKDRFEQFEAPALDNILEDLPDVHTDPFWNSLREKIHSFQEIKQLSAPNG
LHATLRNYQAQGLSYLSFLREYGFGGILADEMGLGKTIQTLSFIQHMVETGSDGPNLIVV
PTSVLPNWDREAEKFVPGLKRLIIYGTRRENMFKQIEESHLVITTYALLRRDLEELQNYE
FNSIILDEAQNIKNPNTITARSVRKIQAKQRLCLSGTPIENNLFELWSLFEFLMPGFLGS
QHSFQRGIIKPIKDGDADTLDYLRNRVKPFILRRTKSEVAKDLPPKIENIQYCALADEQA
ELYAALATKLRQQVLNDVDEKGMAKSQMSILDALLKLRQICCHPRLLKLEMPGFSTNLPS
GKFDAFKDMITEVVEEGHKVLVFSQFVSMLHIIRSWLQISEMPFAYLDGTSKDRFDQVDR
FNNNKDIPIFLISLKAGGTGLNLTSADYVIHYDPWWNPAVEDQATDRAHRIGQTSQVFSY
KMICSNTVEEKILKLQEMKKGVADAIIPGQDSWKSLTRSDLEMLFEV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagcatcagcgagacgactgctcaacacactcgtggaagacaccattccggaa
tacatcattgatggttcccgatatatccttgaatccggaggcgttcagaagatcagcctc
aagaagagcgagggctattgggacatcgaaggaaccgttcagggtgaggacttccagata
tactcccccaagctcaatgtcgactttgaagaagattcagtcaactacatgtgcaattgt
ccggaggccttttccggtgcctgccgccatgtaggcgctgccgccatcaagtttctcgca
acccttgagaccaagcccggtgacgatgccgaaccgcagaagcccaagacggactggcga
cagaacttccgcgcattcttctctaccgacatagagcccgaggcaggccgtcattacctg
atataccgtttccatcccgaaccgggccgcctgcaggtatcctttttccgtgcacgccag
aacaaatcgggcctttccaccgtgcataacgaagtgacgctggaacagatcatcgagaat
cccgactggtgtgaactgtcgcccaaactgcctatcgttgcacagcagatcggacgctac
aacgactatttcggccaccgtgtggaggttccggacggactgctcacgtggttcctgtgg
accgtgcgccgtgaatactatcttttctggaaggataccgactctccctgccgtgttgaa
atcggcacaatggatctcaagctcaagcctcagctcactgaagaagggctgaccttcgac
gtgatgatccgcagcgagggcaaacctccccaatccatcgtggacagcgaagtgaccttt
cacgggcagattcccctatgggtatgctggaacaagggattttaccccgtttataccagc
ctgaactcctcactggttcaggatctggccctgcagcctcccgtgatcgagaaggaagac
attcccgaattccttgaccgcgtctggacgcagctgcctgccacggacctgttcggacag
gaagaattcctcaagcacatggaacccatcttcattcctgccacgtacaatcccaaactg
ttcctcgacgaagaaggttctctgctcacgctcgagattcagaacctctatgagaccgtg
cacggtgaattcctgctgcccggccccaaccccagcttcatgaccggcagctactctttt
gaaggcagcacctatcttatccgccgcatgcaggaagaagaagcgaacctgaccgatctg
ctgctctccatgaattttcagcccagaaacaacagggtgtggttccttgaaccggaagaa
gccatcaccttccttctggatgcctaccccaagctggtcgagcagtatcgcgtctatggc
gagaaggccctgtccaagtacaaagtgcgtcttaccacgcccgccattaccgccacggtg
gaatccaacgaggatgaaaagtggttctcgctggaaatcgaggtggaatacgacgggcag
cgagtgcctatcgacaccatctggaaggcatgggtgcagggcaagcgctatgtgcagctc
aaggacggctcttacaccagcctgcctgaatcgtggctggaaaaaatcgcccacaagctg
cgcgccatgggccttgacgcagaaaaacccccgaaggaccgcttcgagcagttcgaagcc
cctgcgctggacaatattctggaagacctgcccgacgtgcacacggacccgttctggaac
agtctgcgcgagaaaatccattccttccaggaaatcaagcagctcagtgcacccaacggg
ctgcacgccaccctgcgcaattatcaggcgcagggcctgagctacctcagcttcctgcgc
gaatacgggttcggcggcattcttgctgacgaaatgggtctcggtaaaaccatccagacc
ctttcattcatccagcacatggtggaaaccgggtccgacggtcccaacctcatcgtcgtg
cccacgtccgttctgcccaactgggatcgtgaagcggagaagtttgttcccggcctgaaa
cgcctgatcatctacggcacccgccgcgaaaacatgttcaagcagatcgaagaatcgcat
ctcgtcatcacgacgtatgctctgctccgacgcgaccttgaagaactgcagaactacgaa
ttcaactccatcattcttgacgaagcccagaatatcaagaacccgaacaccattacggcg
cgttccgtgcgcaagattcaggctaaacagcgcctgtgcctttccggtacgcccatcgaa
aacaacctgttcgagctctggtcgctgttcgaatttctcatgcccggcttcctcggttcg
cagcattccttccagcgcggcattatcaaacccatcaaagatggcgatgccgatacgctc
gactacctgcgcaaccgcgtcaaaccgttcattctgcgccgtaccaagtccgaagtggca
aaagacctgccgcccaagatcgagaacatccagtactgcgcccttgccgacgaacaggcg
gagctgtatgccgcactggcaaccaagctgcgccagcaggtgctgaacgacgtggacgaa
aagggcatggccaagagccagatgtccattctggacgccctgctcaagctgcgccagatc
tgctgccacccgcgcctgctcaagctggagatgcccggattctccacgaacctgccttcc
ggcaagttcgacgctttcaaggacatgattacggaagtggtggaagaagggcacaaggtg
ctcgtgttctcgcagttcgtgtccatgctgcacatcatccgctcctggctgcagatctcg
gagatgcccttcgcctatcttgacggtacctcgaaagaccggttcgatcaggtggacagg
ttcaacaacaacaaggacattcccatcttccttatctccctcaaggcaggcggaacgggt
ctgaacctgaccagtgccgactacgtcatccactacgacccgtggtggaaccccgctgtg
gaagatcaggcaaccgaccgcgcacaccgcataggccagacctcgcaggttttctcgtac
aagatgatctgctccaacaccgtggaagaaaagatcctcaagctgcaggaaatgaaaaag
ggcgttgcagatgccattatccccggacaggattcatggaaatcgctcacccgttctgac
cttgaaatgctctttgaagtgtaa
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