Desulfovibrio subterraneus: LN040_04760
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Entry
LN040_04760 CDS
T08953
Name
(GenBank) polyprenyl synthetase family protein
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00900
Terpenoid backbone biosynthesis
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
Module
dsb_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LN040_04760
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dsb01006
]
LN040_04760
Enzymes [BR:
dsb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LN040_04760
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LN040_04760
2.5.1.29 geranylgeranyl diphosphate synthase
LN040_04760
Prenyltransferases [BR:
dsb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LN040_04760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WBF68420
LinkDB
All DBs
Position
complement(1018470..1019366)
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AA seq
298 aa
AA seq
DB search
MTPQELKARLGESARMVESYLAECLHGRNIPEGLLKAMEYSLLAGGKRLRPVLCLAVAQM
MGLEPSRVLPFASSIEFIHTYSLVHDDLPAMDNDDLRRGKPSNHKMFGEASAILAGDGLL
TEAFAVMGSVAGDIPADRVVRAMVEVATAAGSGGMVGGQQLDMEYTGRDGVSYDELRGMH
AMKTGALIRCSCLSGAILAGASEEDNQRIRIYGEAIGAAFQIVDDILDEVGDEAQLGKPV
GSDIEQGKTTYPSLMGIDKSRELAQQHVDRAIEQLRPYEGPDADFLRCLAQYIVDRVS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgcaggagcttaaggcgcgtctgggcgaaagtgcccgcatggtggaatcgtat
ctggcggagtgcctgcacgggcgcaatatccctgaagggttgctcaaggccatggaatac
agtctgctggcaggtggcaagcggcttcgtcccgttctgtgccttgccgtggcacagatg
atgggtcttgaaccttcgcgcgtgctgccttttgcctcaagcatcgagttcatccacacc
tattcgcttgtgcacgatgacctgcctgccatggacaacgatgatctgcgtcgcggcaag
ccttccaaccacaagatgttcggcgaggcttctgccattctcgcgggcgatggcctgctg
accgaggcctttgccgtaatgggctctgtagcgggtgatattccggcagaccgcgtggtg
cgtgccatggtggaagtggcaactgcggccggttccgggggcatggtcggcggccagcag
cttgatatggaatacaccggacgcgatggcgtgagctatgacgaactgcgcggcatgcac
gccatgaagaccggcgcgcttatccgctgttcctgcctttccggtgccattctggccggt
gcctctgaagaggacaatcagcgcatcagaatttacggcgaagccataggcgcagctttc
cagatcgtggacgatatccttgatgaagtgggcgacgaagcccagctcggcaagcctgtg
ggcagcgatatagagcagggcaagacgacgtatcccagcctaatgggcatagacaagagc
cgcgaactggcccaacagcatgtggacagggccattgagcagctgcgtccctatgaaggg
ccggatgccgacttcctgcgctgtcttgcgcaatacattgttgacagggtgtcgtaa
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