Desulfovibrio subterraneus: LN040_05415
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Entry
LN040_05415 CDS
T08953
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LN040_05415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_05415
02044 Secretion system [BR:
dsb02044
]
LN040_05415
Transporters [BR:
dsb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LN040_05415
Secretion system [BR:
dsb02044
]
Type I secretion system
Adhesin protein transporter
LN040_05415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
AAA_33
RNA_helicase
Halogen_Hydrol
NACHT
AAA_30
AAA_23
TsaE
AAA_13
AAA_22
Zeta_toxin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WBF68544
LinkDB
All DBs
Position
complement(1168090..1170192)
Genome browser
AA seq
700 aa
AA seq
DB search
MGELFRRMAARPFAAFELVLATFFVTLLNLASPIFVIQVLNRYVAFGFDGTLITLTSGMV
VATALLYAFNAIRTRLAVVVMGDEDERLAAAGHEAMLRIRAQAMGPEVVRAAYEIPARAA
AIRAASDSAVALQLLDAPFALLYLGVAFLLSPPLALVGLIGMVLMAAFNRRNNDAQAQLA
HDMDREEAEKRRMTASVLEGADTVRAFRCAGFVRRAWSERNAGLEALRFALTLSREKGRS
AGSVIAMLQSVGIYSVGAMQVVNGDISVGVLIGVNILASRALSAAGGLASSLSLAARARS
ARHDLLRFLSLPQEPTSGTARDTFAGRLELRDVAFGWPGSHSPLFESLSMVLVPGMLTVV
QGPNGAGKTTFARMLAGLVEPARGEIVADGITLRQIAPDWWRQQICYLPQETVLFPATLR
ENICIGQTTPCGAASGDAASGDVVPGKAAPNGAVSDETALNRAINDADLASFVFSRSGGL
ELMLEDAGRSLSMGVKKRIALARAMMTGGRLVVLDEPTEALDFSGRQAVFRYVINMIREG
RTVVVVSADPGFERIAGQKLDLGSKPVPVISGRARSVSPRASGQGTPLEHVSGIGVPSGN
AGDEGNAGDEGNEGNEGNEVTASLAEADTGSGERAQGETGAEADQTMQQFTGLDLNQGAE
QGDGRNAGRATGRENSDSLKNAAAAPVEESTPSGEEGTGR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaattattcagacgcatggccgcacggccgtttgccgcattcgaactggttctg
gccaccttctttgtcacgctgctcaatctggcatcacccatcttcgtcattcaggtgctc
aaccgctacgttgctttcggcttcgacggtacgttgatcactctcacctccggcatggtg
gtggctactgccctgctgtatgcctttaatgccatacgtacgcgtcttgctgtggtggta
atgggggatgaagatgaacgccttgccgcggcgggacacgaggccatgctccgcatccgg
gcgcaggccatggggcctgaggtggtgagggctgcttacgaaattcccgcacgggctgcc
gccatacgggccgcatccgattctgccgtggcgttgcagttgctcgatgcccccttcgcc
ctgctgtatctgggggtggcctttcttctttctcctccccttgctcttgtgggactgatc
gggatggttcttatggcggcattcaaccgccggaacaacgacgcacaggcacagcttgcg
cacgacatggacagggaagaggccgaaaagcgccgcatgacggcttctgtgctggaaggt
gcagataccgtgcgggccttccggtgcgcgggatttgtccgccgcgcatggagcgagcgg
aatgcggggctggaagcactgcgttttgcgttgactctgtcgcgtgagaaggggcggtca
gccggttcggtcatcgccatgctgcagagtgtgggcatctattccgtgggagccatgcag
gtggtgaacggcgatatctcggtcggggttctcatcggtgtgaatattctcgcttcccgt
gcattgtccgcagctggcggactggcctcttcgttgtcgcttgcggcccgcgcgcgatct
gcccgccatgatctccttcgttttctctcgctgccgcaggaaccgacatccggcactgcg
cgcgatacctttgccggcaggctggaactgcgcgatgtggcattcggctggccggggagc
cattctccgctgttcgaatcgctatccatggtacttgttccgggcatgctgaccgttgtg
cagggccccaacggtgccggtaagactacctttgcccgtatgctggcagggcttgtggaa
cctgcgcggggcgaaattgtggcagacggcattacactgcgccagatcgcccctgactgg
tggcggcagcagatatgctacctgccgcaggaaacggtgctctttcccgcaacgctgcgg
gagaatatttgtatcggacagaccacgccatgcggggccgcgtctggtgatgccgcgtct
ggtgatgttgtaccgggcaaggctgctcccaacggggctgtatcggatgaaaccgcactg
aaccgtgccattaatgacgctgaccttgcgtcctttgtgttttcccgttccggagggctg
gagctcatgctggaggatgcagggcgttctctttccatgggagtgaaaaagcgcattgcg
ctggcccgtgccatgatgacgggaggcaggctggttgttcttgatgaaccgactgaagct
ctggatttttccggacgtcaggctgtgttccgctatgttatcaatatgatcagggaaggg
cgcaccgttgtggttgtctccgccgatcccggtttcgagcgcatagcagggcagaagctt
gatctgggcagtaagccggtgccggttatttcgggcagggcgcgcagcgtgtccccccgt
gcgtccggacagggcacgccgcttgaacatgtttccggtatcggagtcccgtcaggaaat
gcaggggatgaaggaaatgcaggggatgaagggaatgaagggaatgaagggaatgaagtg
acggcatcgcttgccgaagcggacaccggttccggcgaaagggcacaaggtgagacaggt
gcagaagctgaccagactatgcaacagttcacgggactggatttaaatcagggtgcggag
cagggtgacggccggaatgctggccgggctactggccgggagaatagtgattctttaaag
aatgcagccgccgcaccggttgaagaatcgacgccttccggcgaagaggggacgggacga
tga
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