Desulfovibrio subterraneus: LN040_05655
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Entry
LN040_05655 CDS
T08953
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
dsb
Desulfovibrio subterraneus
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
GAF
AAA
AAA_2
AAA_16
GAF_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WBF68588
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Position
1231486..1233204
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AA seq
572 aa
AA seq
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MSMKDRTPSPSASRIPDDQDPQLIPTLHSVDVSPFLDLMLGIARERTIEGILRVTKRTYR
GRHVIFGGLWIVASLRITGTSDYSAPGADRKLRLMAFSGAGKPRPAIWRHKEGTYDLVPF
SDPLLGPCTKGEPSYAASGDQWDRPDWAVEYGYHAYSAFPIMHKDELLGVMAVFYDRPMV
DELADMLLMHRKMHKIYADSLAAAVANAAAFDEIQTLRRELELENEHLRRAVRTAHADDH
IVGNAPALHKVMEQIEVVAPTDATVLILGESGTGKELLAEAIHKRSHRRMGPLVRVNCSA
VPHELFESEFFGHIKGSFTGAVRDRTGRFLMADGGTLFLDEVGEIPLELQGKLLRVLQEG
TFEPIGDDRPRKVDVRIVAATNRDLAADVEAGLFRQDLYFRLSVFPLHNPPLRERLEDIP
VLAHHFVSNAARRLGVTEPKLHYRHIQQLQAYDWPGNVRELQNEIERAVIMSHNGGLEFN
RLGAHRIGTPPSGAPHMSGTPHLHAATPAYTPDGPLYTEMQMEELHRENTVRALEACGWR
VQGEGGAAELLGIKPTTLQSRIKKYGLKKPAA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaagacagaacaccctccccatctgccagccggataccggatgatcaagac
ccgcaactcattcccacgctgcacagcgttgatgtgagcccgtttcttgacctcatgctg
ggcattgcccgtgagcggaccattgaaggcattctgcgcgtaaccaagcgtacctaccgc
ggccgacacgttatcttcggcggactatggattgtggcctcgctgcgcattaccggcacc
tccgattacagcgcaccgggtgctgaccgcaagctcaggctcatggccttttcaggtgca
ggcaagccgcgtccggccatatggcggcacaaggaaggcacctacgaccttgttcccttt
tccgacccgctgctcggtccctgcaccaagggcgagccaagctatgccgcctccggcgat
cagtgggacaggcccgactgggccgtggaatacggctaccacgcctattccgcttttccc
atcatgcacaaggacgagctgctcggtgtcatggcggtgttctacgaccgtcccatggtg
gacgagctggccgacatgctgctcatgcaccgcaagatgcacaaaatttatgccgactcg
ctggctgcggccgtggcaaacgccgccgcattcgacgagattcagaccctgcgccgcgaa
cttgagctggaaaacgaacacctgcgccgggcggtacgcacagcccatgcagacgaccat
atcgttggcaacgctccggccctgcacaaggtcatggagcagatagaggtggttgcgccc
accgatgccacggtgctcattctcggcgaatccggcacgggcaaggaactgctggcagaa
gccatacacaaacgttcgcaccgccgcatggggccgcttgtgcgggtaaactgctcggca
gtgccacatgaactgttcgagagcgaattcttcggccacatcaaaggctccttcaccggt
gccgtgcgagacaggacagggcgttttctcatggccgacggcggcacgctcttcctcgac
gaagtgggcgagattccgcttgaactgcagggcaagctgctgcgcgtgttgcaggagggc
accttcgagcccataggcgacgaccgcccccgcaaggtggatgtgcgcatcgtggctgcc
acaaaccgcgaccttgcagcggatgttgaggcgggcctgttccggcaggacctctacttc
cgcctttccgtctttcccctgcacaacccgccgttgcgcgagcggcttgaagacataccc
gtgcttgcgcatcatttcgtcagcaacgcggcccgtcggctcggcgtaaccgaaccaaag
ctccactatcgccacattcagcagctgcaggcctatgattggcccggcaacgtgcgggaa
ctgcaaaacgagatcgaacgcgcggtcatcatgtcccacaacggcgggctggaattcaac
cgtctcggtgcccaccgcataggcacccccccctcgggagcaccccatatgtcgggcacg
ccccatctgcatgcagcgactccggcatacacaccggatggtccgctctacaccgaaatg
caaatggaagaactgcaccgcgaaaataccgtacgcgcccttgaggcctgcggctggcgt
gtgcagggcgaaggcggagccgcagagctgctgggcataaagcccaccaccttgcaatcc
cgcatcaaaaaatacgggctgaagaaaccggcagcatga
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