Desulfovibrio subterraneus: LN040_05960
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Entry
LN040_05960 CDS
T08953
Name
(GenBank) ABC transporter substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02010
ABC transporters
dsb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LN040_05960
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN040_05960
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_05960
Transporters [BR:
dsb02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LN040_05960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
WBF68642
LinkDB
All DBs
Position
complement(1302124..1303527)
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AA seq
467 aa
AA seq
DB search
MILSLVCCLVLAAGGCTGGDTRDYDEYARQGVTASEIRLGSSLPLTGHASYLGEQTLRGA
LSYIKYVNESGGVHGRKIVLDARDDGYDPPRCLANTQQLMIHGNVFALFGYVGTPTTMRI
LPLVEEARIPLLGMFTGANGLRIPFNRYVINVRASYYQETGAAVRHLVQDLGLKRIAVFY
QYDAYGFDGLTGAELVLRELGLAPVARGSYIRGTNDVTDGLKRILEERPEAVVMVGTYEP
CAEFIRRADAAGLKAVYYNLSFVGGEELARRLPHDLKSPVVLSLVVPPPTAPEAPRIMQV
ASDYVTHLKRFFPDETPNAVGLEGYINALVLVEGLRRAGPDITRETFIDAIDSLSSFSLG
GTNVSFSPRNHQGMESVFFSVLRGGRFELVNDFRTVLAGGLKDGDPANRNEGAANKNESS
ANKNGKPVNALLPPVVPPGTTSPDIVIPDAVPSEAARSKEAGQGGAQ
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtcactggtgtgctgtcttgtgctggccgccggtggctgcaccggcggagac
acccgcgattatgacgaatatgcccggcagggggttacggcatcggaaattcgtctcggt
tcatcactgcctcttaccggccatgcaagctatctgggcgagcagaccctgcggggagcc
ctgagctacatcaaatatgtcaacgaaagcggcggggtgcacggcagaaagattgtgctc
gatgcccgcgatgacggctacgatcctccccgttgccttgcaaacacccagcaactgatg
attcacggcaacgtgtttgccctgttcggctatgtgggcacccccaccaccatgcgcatt
ctgccgctggtggaagaggcccgcatccccctgctgggcatgttcacgggagccaacggc
ctgcgcatccctttcaacagatatgtcatcaatgtccgcgcatcctattatcaggaaacg
ggcgctgcggtgcgccaccttgtgcaggacctcggactaaagcgtatcgccgtgttctac
cagtatgatgcgtacggctttgacgggcttaccggcgctgaactcgtgctccgtgaactg
ggactggcaccggtggcgcgtggttcgtacatacggggtaccaacgatgttaccgacggc
ctgaagcgcattctggaagaaaggcccgaggctgtggtgatggttggcacctatgaaccc
tgtgccgagttcatccgcagagccgatgccgctggactgaaggccgtatactacaatctt
tcgttcgtgggcggtgaggagcttgcgcgccgcctgccgcatgatctcaagagccctgtc
gtgctgtcgttggtggtgccgcctcccaccgcgccggaagccccgcgcatcatgcaggtt
gccagcgattacgtgacgcacctgaagcgcttttttccggacgaaacccccaatgccgtg
gggctggagggctacataaatgcccttgtactggtggaagggctgcgccgcgcagggccg
gatatcacgcgcgagacattcatcgatgccattgattcgctttcgtccttctcgctgggc
ggaacgaacgtttcgttcagcccccggaatcatcagggcatggaatctgtgtttttctcc
gtactgcgcggtggccggttcgagctggtgaacgacttccgcaccgtgctggctggcggg
ctgaaggacggagaccctgcaaataggaacgaaggggctgcaaataagaacgagagttct
gcaaataagaacgggaagcccgtaaatgcattgctcccgcctgtcgtgccacccggtaca
acctccccggatattgtcattccggacgcagtgccgtccgaggcggcccggtcaaaagag
gcagggcagggaggcgcgcaatga
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