Desulfovibrio subterraneus: LN040_06265
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Entry
LN040_06265 CDS
T08953
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsb03009
]
LN040_06265 (rimO)
Enzymes [BR:
dsb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LN040_06265 (rimO)
Ribosome biogenesis [BR:
dsb03009
]
Prokaryotic type
ribosomal protein modification factors
LN040_06265 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WBF68698
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All DBs
Position
1374585..1375877
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AA seq
430 aa
AA seq
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MISIYSISLGCPKNRVDTEWLLGAVPGTVQAVDDPSGADLVVINTCGFIQPAVEESVRTI
LQTINDVEEAKKRPLLAVTGCLVGRYGQKELSAELPEVDLWLTNLDMVRWPEMVANALGL
APKADPMRILSTGPSYAYLKISDGCDHNCAFCTIPSIRGTLASASADSIVRDARHMLDQG
VKELIFVAQDVTGYGKDLGLKHGLRELLDRILPLDGLARLRLMYLYPAGLTKDFLHYLRD
AGEPFVPYFDVPLQHAHPDVLSRMGRPFARNPREVVDRIRDVFPEAALRTSFIVGYPGET
EEHWEHLRDFMVETRFHHMGVFAYKAEEGTPAAEMPDQVEDAVKEWRRDALMEIQAEISE
EILATYEGERMSVLVDAEHEEWPGLHVGRTWFQAPEVDGVTYISGPGVEPGALVDADIVE
TREYDLVALS
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgataagcatttattccatcagtctcggatgcccgaaaaacagggtggatacggagtgg
ctgctcggcgctgtacccggcactgtgcaggcggttgacgatccctcaggggcggacctt
gtggtcataaacacctgcggcttcatccagcccgccgtggaagaatctgtccgcaccatt
ctgcagaccatcaacgacgtggaagaggcaaaaaaacgccctctgctcgcggtgacgggc
tgccttgtcgggcgttacgggcagaaggaactgtcggcagaactccccgaggtggacctg
tggctgaccaacctcgacatggtgcgctggccggaaatggtggcaaacgctctggggctt
gctcccaaggcagaccccatgcgtattctttccaccggtccttcgtatgcctatctcaaa
atcagcgacggttgcgaccacaactgcgccttctgcaccatcccgtccatacgcggcacg
ctggccagcgcttctgcagacagcattgtgcgcgatgcccggcacatgctcgatcagggc
gtgaaggaactcatcttcgtggcgcaggatgtaaccggctacggcaaagacctcggcctc
aagcacggcctgcgcgagctgctcgaccgcatcctgccgctggacggccttgcgcgcctg
cggctcatgtatctctaccctgcgggcctgaccaaagattttctgcactatctgcgtgac
gcgggtgaaccttttgttccctatttcgacgttcccctgcagcacgcccaccccgacgtg
ctttcgcgcatgggccgcccctttgcgcgcaacccgcgcgaggttgtggaccgcatccgc
gacgtttttcccgaagcggcactgcgcaccagcttcattgtgggctaccccggcgaaacc
gaggagcactgggagcaccttcgcgatttcatggtggaaacccgcttccaccatatgggt
gttttcgcctacaaggccgaagaaggcacccccgcagccgaaatgcccgatcaggttgag
gatgccgtaaaggaatggcgccgcgatgcgctcatggaaattcaggccgagataagcgaa
gaaattctcgccacctatgaaggcgaacgcatgtccgtgctggtggatgccgaacacgaa
gagtggccgggcctgcatgtgggccgcacgtggtttcaggctccggaggtggacggcgtg
acctatatcagcggccccggagtggaacccggcgcactggtggatgccgacatcgtggaa
acacgggaatacgaccttgttgccctgagctga
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