Desulfovibrio subterraneus: LN040_06760
Help
Entry
LN040_06760 CDS
T08953
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00550
Peptidoglycan biosynthesis
dsb01100
Metabolic pathways
dsb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LN040_06760 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LN040_06760 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
LN040_06760 (mrdA)
Enzymes [BR:
dsb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LN040_06760 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LN040_06760 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WBF68792
LinkDB
All DBs
Position
complement(1472507..1474303)
Genome browser
AA seq
598 aa
AA seq
DB search
MSMQLDPEGYQPPRGGLLLLQGLVLLLFFVFFLRFWFLQIHKGDEFARLARENRLRQERI
DAPRGLLRASGGELLAENRPAYALGLVREDCKDIASTIAQVSHWTGIPEETLWAKYFKDK
PRVKPFQPLVLVSDVPFDLLAQIESNRMLWPGLEIVIRPRRFYLQGPLFAHVLGYVAEAN
EKELEENSDLALGDAVGKQGLELVLENRLRGNKGLQQLEVDVMGRELNRKMVQEPMAGDS
ILLSLDFELQRIASEAFEDQAGGLVVMDPDTGKLVALVTQPSFDNNAFAAGLSNKQWSEL
RDNPYFPLQNRVIQSVYPPGSVWKILMAGLLLKEGIDPRETVFCNGEFYLGKTLFRCWKK
HGHGKVDMARSLIESCDVYYYEMLNKIGVDKMEAFAKANGFGEQTGLGLPHERSGLVPSR
DWKRKRFGEAWQRGETVITAIGQGFTLVTPVQVACFLGALMNDGKLMQPSLLADSEPVVR
RSIPLNEAQRLYLLDAMRRTVEDPRGTAKRLRTPGADIGGKTGTAQVVKLKLKANNERQK
FEEMEYWERDHAWMAAWGSKGGKRYVVVCMLEHGGHGGSAAGPIVKKVFDHLFAEEHE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcagcttgatccggaaggctatcaaccaccgcgaggcgggttgctgttgctg
caggggctggttctcctgctgttctttgtttttttcctcagattctggttcctgcagata
cacaagggagacgagtttgcccgtctggcccgtgaaaacaggctgcgtcaggagcgtatc
gatgctccccgcggacttctgcgtgcaagcgggggcgagttgcttgccgagaaccgtccc
gcctatgccctcgggctggtccgtgaagactgcaaggacatcgcctctaccattgctcag
gtgagccactggaccggcatccccgaagagactctctgggccaagtatttcaaggacaag
ccgagggtcaaacccttccagccgctggttcttgtttctgacgtgccttttgacctgctt
gcacagatcgaatccaaccgcatgctctggccggggctggaaatagtcatacggccgagg
cggttctatctgcaggggccgctctttgcccatgtgctcgggtatgtggcggaagccaac
gaaaaggaactggaagagaattccgatcttgcgctcggcgatgccgtgggcaagcagggg
cttgagctggtgcttgaaaacaggttgcggggcaacaagggcctgcagcagctggaagtg
gatgtcatgggccgtgagctgaaccgcaaaatggtgcaggaacccatggcgggcgattcc
attctgctgtctctggattttgagctgcagcgcattgcctcggaagctttcgaggatcag
gccggcggtcttgtagtcatggaccctgacaccggcaagctggttgcgctggtaacgcag
cccagtttcgacaacaacgcctttgccgcagggctttccaacaagcagtggagtgaactg
cgcgacaacccctatttccctttgcagaaccgtgtcatccagtctgtgtatcctcccgga
tcggtgtggaagattctcatggccggtttgctgctcaaggaagggatagacccgcgcgaa
acagtcttctgcaacggggaattttatctgggcaaaaccttgttccgctgctggaaaaag
catgggcatggcaaggtcgatatggcccgctcgctgatcgaatcctgcgacgtctattat
tatgaaatgctgaacaagatcggcgtggacaagatggaagcgtttgccaaggccaacggg
tttggtgaacagaccggtctcggcttgccccatgaacgttccggccttgtcccttcccgc
gactggaagcgcaaacgtttcggcgaagcctggcagcgtggtgaaaccgtcattaccgcc
atcggacagggctttacgctggtaacaccagttcaggtggcctgtttcctcggtgcgctc
atgaacgacggaaagcttatgcagcccagcctgctggcagacagtgagcccgtggtgcgc
aggagcattccgttgaacgaggcccagcgcctgtatctgctggacgccatgcgcagaacc
gttgaagacccgcgcggcacggcaaagcgtctgcgtacgcccggtgccgatatcggcggc
aaaaccggtactgcgcaggtggtcaagctgaagctgaaggccaacaacgagcgccagaaa
tttgaggaaatggaatattgggaacgggaccacgcatggatggctgcatggggcagcaaa
ggcggcaaacggtatgttgttgtctgcatgcttgagcatggcggacacggcggctcggca
gcgggccccatcgtgaaaaaggtcttcgaccacctgtttgccgaggagcatgaataa
DBGET
integrated database retrieval system
