Desulfovibrio subterraneus: LN040_06880
Help
Entry
LN040_06880 CDS
T08953
Name
(GenBank) HD domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LN040_06880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsb03019
]
LN040_06880
Enzymes [BR:
dsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LN040_06880
Messenger RNA biogenesis [BR:
dsb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LN040_06880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_NucTran2_2
PolyA_pol_RNAbd
CNV-Replicase_N
Motif
Other DBs
NCBI-ProteinID:
WBF68812
LinkDB
All DBs
Position
1500810..1502123
Genome browser
AA seq
437 aa
AA seq
DB search
MSQPFKDAIGICKTIMRNGYDAYVVNTLLQKELHNEDREAEIDIACEPTVEELTRLFPGL
QSSPIQGALGLLKEGGITFHFYPADTEDASHPEATLARITPRLLKRLEETGSLPAHLACP
YIPRTYETYDGFVSFNVGEIRMEGIPDETLRRNYLLGIRALRFAANFDLPLEKNTWMAIV
KGASRILDYVPVTEIMDEWRKVEAENMWKFVQLLFESMILHGLLPEIAALSRVIQIKNEE
GEQETVLEHTIGVMHKYPEEFTYDWLGTFAVLFHDVGKLYTAEHDGERWTFYQHHRVGAK
VTRKLLSRLSIPQQDVDLICHLVRQHLRFHSMLTERGIRRFKALDEYPRLIELARADLKA
RGVALTSFNHNMKYLERADTPEQMTEPYLNGNDIMEATGLKPGPHVGIIRDALLKAQIAG
QVNSVEEAVEYVKAYKL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagcctttcaaggatgccatcggtatctgcaaaaccattatgcgtaacgggtac
gacgcctacgtggtgaacaccctgctgcagaaggaactgcacaacgaagaccgcgaagcg
gaaatcgatatcgcctgcgagcccaccgttgaagaacttacgcgcctcttccccggcctg
cagtcttcgcccattcagggcgcgcttggcctgctcaaggagggcggcatcaccttccac
ttctatccggccgacaccgaagacgcatcgcaccccgaggcgacacttgcacgcatcacc
ccgcgcctgctcaagcgtctggaagaaaccggctcgctgcccgcacaccttgcctgtccg
tacattccccgcacctacgaaacctatgacggcttcgtcagctttaacgtgggcgaaatt
cgtatggaaggcattccggacgaaaccctgcgccgcaactacctgctgggcatccgtgcc
ctgcgttttgccgccaactttgacctgccgctggaaaagaatacatggatggccatcgta
aagggcgcatcccgcattctggactacgtgcccgtgaccgagatcatggacgaatggcgc
aaggtggaagcggaaaacatgtggaagttcgtgcagcttctgttcgaatccatgattttg
cacggcctgctgcccgaaattgcagcactttcccgcgttattcagatcaagaacgaagaa
ggcgaacaggaaaccgtgcttgagcacaccatcggcgtgatgcacaagtatccggaagag
ttcacctacgactggctcggcacctttgcagtgctgttccacgatgtgggcaagctctac
actgcggaacacgacggcgaacgctggaccttctaccagcatcaccgcgtgggcgcgaag
gtgacaagaaagctcctttcccgcctttccattccccagcaggatgtggacctcatctgc
caccttgtgcggcagcacctgcgcttccactccatgctgacggaacgcggtatccgccgc
ttcaaggcgctggatgaatacccccgccttatcgaactggcccgtgcagacctcaaggcc
cgcggcgttgcgcttacctccttcaaccacaatatgaagtatctggaacgcgcagacacc
cccgagcagatgaccgaaccgtatctgaacggtaacgacatcatggaagccaccggcctc
aagcccggaccgcatgttggtattattcgtgacgcgctgctcaaggcccagatcgccggt
caggtgaactcggttgaggaagcagtggagtatgtgaaggcgtataagttgtag
DBGET
integrated database retrieval system
