Desulfovibrio subterraneus: LN040_07810
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Entry
LN040_07810 CDS
T08953
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsb03009
]
LN040_07810
Enzymes [BR:
dsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
LN040_07810
Ribosome biogenesis [BR:
dsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LN040_07810
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
FliMN_C
Motif
Other DBs
NCBI-ProteinID:
WBF68990
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Position
1719455..1720669
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AA seq
404 aa
AA seq
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MPQTKHPHSADNHAATSQKAVHESLSPAAPDAAGQHGATPHMPQGIQCAVVPAHMHGQRL
DAALTLILPDSGIRLRRRLFDTHTILVNGSPAAKGRSVQEGDNLLLVPRGNGASQDIAGQ
DITGQAMQPSGIAPHDATVGDAETGDAEAGDVGTADSGEPACPLCETSPELAPRVHIVRR
HAGYAAVFKPGGMHSAHIAGGPANSLESLIAELFPEPEDSGDTAPQLINRLDRLTSGMVM
VAFGPEKAEEFHRLEDAGAVEKLYLAVVHGDLKNPLNIQAALDTAKRRTTRVLATPAEDP
LRHTTILPLGSVTVDGEQASCTLVLASIHKGARHQIRAHLAHAGHPIAGDPIYGPPMDDN
SRHPLYLHHYHIEFGEFSATCPPPQEWHQWQQWLAQGLVLPHNA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaccaagcatccccactcagcagataaccatgcagctacctcacaaaaggcc
gtgcatgaatccctttcgcccgcagcgcctgatgcagcagggcagcacggggcaacgccc
catatgccgcagggaatacagtgcgccgttgtaccggcccacatgcacgggcaacggctg
gatgccgcgctgacgctcattctgccggacagcggcatacggctgcgcaggcgccttttc
gacacccacacaattctcgttaacggttcacccgccgccaaaggcagatctgttcaggag
ggagacaaccttctgcttgtcccccgtggcaatggcgcatcacaagacattgccggacaa
gacattaccggacaggccatgcaaccgtctggcatcgcgccccatgacgctaccgtagga
gacgcagagactggtgacgcagaggctggcgatgtcggcaccgcagattccggtgagcct
gcctgccctctctgcgaaaccagcccggagctggccccccgcgttcatattgttcgcagg
catgcgggctatgccgccgttttcaagcctgggggcatgcactccgcccacatagcaggt
ggcccggccaattctctggaatccctgattgccgaactttttcccgaaccggaagactcc
ggcgatacggctccgcagctgataaaccggctggacaggctcacatccggcatggtcatg
gtggcgttcggtccggaaaaggctgaagaatttcacagactcgaagacgcgggtgccgtg
gaaaagctgtatcttgccgttgtgcacggcgatctcaagaatccgctcaacattcaggca
gcactggatacggccaaacgccgaaccacccgcgtgcttgccacccctgccgaggacccg
ctacgccacacaaccattctgccccttggcagcgtcactgttgatggtgagcaggcatcc
tgcacgctcgtgctcgcctccatccacaagggcgcgcgccaccagatacgggcacatctt
gcccatgccggacaccccatagcgggcgatcccatctatggaccgcctatggatgacaat
tcccggcatccgctctatctgcaccactaccacatcgaattcggcgaattcagcgccacc
tgccctcctccgcaggagtggcaccagtggcagcaatggctcgcacaaggtcttgtgctg
ccccacaacgcataa
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