Desulfovibrio subterraneus: LN040_08280
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Entry
LN040_08280 CDS
T08953
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsb03016
]
LN040_08280 (truB)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LN040_08280 (truB)
Transfer RNA biogenesis [BR:
dsb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LN040_08280 (truB)
Prokaryotic type
LN040_08280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
WBF69070
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All DBs
Position
1816573..1817499
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AA seq
308 aa
AA seq
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MSEQYPAQQDGVLVVYKPKGPSSGTCIGKIKRLGQKKIGHAGTLDPMAQGVLIVLLGQGT
KLSGHLMSGGAKVYSGTIKLGETTDTWDAEGEIVATAPWDHITEADVLTEVGNWLGESEQ
EVPSYSAAKHNGQALYKLARQGKETPVKTKTINISHAEVLSFELPYVRFRVRCTSGTYIR
SLAHSLGLRLRCGAVLTELIREYSHPFSMDEAHTLDAILEAPHTLPEKVIPLEKALPEWP
KIVLDEEMAKNVRNGMSVPYNPETIANMPFAVGISAMLLGPDHTPLALAETQIVQRQPAW
TIVRGLWQ
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaatatccagcacagcaggatggtgtgctggtcgtttacaagcccaagggg
ccctcttcgggtacctgcataggcaagattaaacgactgggacaaaagaaaataggtcac
gccggcaccctggaccccatggctcagggtgtgcttatcgtattgctgggacagggcacc
aaactgtccggccatctgatgtccggtggagccaaggtttactccggcaccatcaaactg
ggcgagaccactgatacctgggatgcggaaggcgaaatagttgccaccgccccgtgggac
catatcaccgaagcagacgtgctcactgaagtgggcaactggctcggcgaaagcgaacag
gaagttccctcctactctgctgccaagcacaacgggcaggcgctttacaagctggcgcga
caggggaaggagactccggtcaagacaaagaccatcaatatttcgcatgcggaagttctg
tcgtttgaactgccgtatgtgcgattccgggtgcgttgcacctccggtacctacattcga
tccctggcccacagcctggggttgcgattgcggtgcggggcggtgcttacagagctcatc
cgggaatatagccacccgttctcgatggacgaggcacacacgctagacgcgatactcgaa
gcgccgcacaccctgcccgaaaaggtcatcccgctggaaaaagccctgccggaatggccc
aagatcgtccttgacgaagaaatggcaaagaatgtgcgaaacgggatgtcggttccctac
aatccggaaaccattgccaatatgccctttgccgtagggatttccgcaatgcttctcgga
ccggaccacactcctctggcgcttgccgagacgcagatagtgcaacggcagcccgcctgg
accatcgttcgcggattgtggcagtaa
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