Desulfovibrio subterraneus: LN040_08300
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Entry
LN040_08300 CDS
T08953
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
dsb03012
]
LN040_08300 (selB)
Translation factors [BR:
dsb03012
]
Eukaryotic type
Elongation factors
LN040_08300 (selB)
Prokaryotic type
LN040_08300 (selB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
WHD_3rd_SelB
WHD_2nd_SelB
Beta-barrel_SelB
GTP_EFTU_D2
MMR_HSR1
SRPRB
GTP_EFTU_D4
Motif
Other DBs
NCBI-ProteinID:
WBF69074
LinkDB
All DBs
Position
complement(1820938..1822854)
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AA seq
638 aa
AA seq
DB search
MPVVLGTAGHIDHGKTTLVKALTGIDCDRLEEEKKRGITIELGFAFFGLPDGTRMGIVDV
PGHERFVKNMVAGASGIDFVMLVIAADEGVMPQTREHLEICSLLGIETGFVALTKTDMVD
EEWLALVQEDVANFLQGSFLEGAPIFPVSSHTGAGLDEVRQYIVRMEKELAPRRRSDLFR
LPVDRVFTMKGHGTVVTGTMISGSVAIGTDVQLYPHDTLTKVRGLQSHGGTVEVAPAGRR
TAINLHGLEVADIERGDVVALPGSLFPSQTWHVELRCLSSAPTPLKNRTEVHVHHGSRET
LARLYFPDRDKLMPGETALCEMRFTDPMVGVFGDRCVIRSFSPLRTVAGGKLLHPHAQPL
RKKHPRYAQMLEALQSLSKAEPDDRIRLHVGMAGETGVSFRELCILTDIESKALEKGLNL
LGGKQELACFDKEERSYVSGGILEELGTTALDFVADYHRKEPLKPGMPRGMLTSGWGRKL
APKLVHFVVERLIKQGKLAVEGDVMRIAGHKVSLAADQEGLRAKLLEAHAAGGITPPNLK
DVLEPLNVDVKEAGSVLRLMEGSGELVKVKDGMYFHGPAMEKLVGMVREYFATHDDLGPN
EFRDLTGLSRKYLIPLLEYFDKARITLRVGDKRKLRGA
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgttctgggcactgccggacatatcgaccacggaaagacaaccctcgtgaag
gcactgacgggcatagattgcgaccgtctggaagaggagaagaagcgcggcattaccatt
gagctgggctttgccttcttcggtctgccggacggaacccgcatgggcatagtggacgtg
cccggacatgagcgctttgtgaagaacatggttgccggggcctcgggtattgattttgtc
atgctggtcattgccgcggatgaaggggtaatgccccagacccgcgagcatctggaaata
tgttcgctgctcggcattgaaaccggttttgtggccctgaccaaaaccgacatggtggat
gaggaatggctcgctcttgttcaggaagatgtggcgaattttctgcagggttcctttctt
gagggggctcccatattccccgtgtcctcgcacacaggcgcggggctggacgaagttcgg
cagtacatcgtccgcatggaaaaggaactggcaccccgtcggcgttccgaccttttccgc
ctgccggtggaccgcgtgttcaccatgaagggccacggcacggtcgttaccggcaccatg
atttccggttccgtggccatcggcacggatgtgcagctgtacccgcacgacacgctgacc
aaggtgcgcggactgcagagccatggcggcaccgtggaagttgcccccgcgggcaggcgc
acggccataaacctgcatgggcttgaggttgccgacatcgaacgtggcgatgtggttgcg
cttccgggatcgctgttcccctcccagacgtggcatgtggagctgcgttgcctttcctcc
gctcccacaccgctgaagaaccgcacggaagtgcatgtgcaccacggctcgcgcgaaacc
ttggcgcgtctttatttcccagacagggacaagcttatgcccggtgaaacggcattgtgc
gagatgcggttcaccgatcccatggtcggtgtattcggcgaccgttgcgttatccgctcc
ttttcgcccttgcgcacagtggcgggcggcaagctgctgcatccgcatgcgcagccgctg
cgcaagaaacatccccggtatgcacagatgcttgaagccctgcagagcctgagcaaggcc
gaaccggatgaccgcatccgcctgcatgtaggcatggcgggagaaaccggcgtgagcttc
cgtgaactgtgcattctgacggatatcgaatcaaaggctctggaaaagggactgaacctg
ctgggcggcaagcaggagcttgcctgctttgacaaggaagaacgcagttacgtttctggc
ggtattctggaagagctgggcacgacggcattggactttgtggcagactatcaccgcaag
gaaccgctcaagccggggatgccccgcggcatgctgacctcaggctggggacgcaagctt
gcgcccaagctggtacactttgttgtggagcggctcataaagcagggcaagctggcagtg
gaaggcgacgtgatgcgtattgccggtcacaaggtttcccttgcggcggatcaggaaggg
ctgcgcgcaaaactgctggaagcgcatgccgctggcggcattaccccgcccaacctgaag
gatgtgcttgagcccctgaacgtggacgtgaaagaggccggttcggtgctgcggctcatg
gagggctcaggcgagctggtcaaggtgaaggacggcatgtacttccatggtcccgccatg
gaaaagctggtgggcatggtgcgcgaatattttgcgactcacgatgaccttgggcccaat
gaattccgcgatctgacaggcctgtcccgcaagtacctcatcccgcttctggaatatttc
gacaaggcacgcattacgctgcgcgtgggtgacaagcgcaagctgcgcggggcctga
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