Desulfovibrio subterraneus: LN040_08320
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Entry
LN040_08320 CDS
T08953
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LN040_08320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsb03400
]
LN040_08320
Enzymes [BR:
dsb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LN040_08320
DNA repair and recombination proteins [BR:
dsb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LN040_08320
Prokaryotic type
LN040_08320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WBF69078
LinkDB
All DBs
Position
complement(1825236..1825949)
Genome browser
AA seq
237 aa
AA seq
DB search
MARKKIVEKGGNGAQIPAEWLAAVPAFRQGEHLPVLKAVAARRSKGAVYPPEELVFNALH
LASPEAVRVVIVGQDPYHGPGQAHGLSFSVPEEAIAAGAKFPPSLRNIFKEIEAEYPDKA
VACQSSDLTRWARQGVLLLNSTLTVDAGKAGSHAALGWGAITDGIIATVSSLCAPTVFML
WGSHAQQKAALVNSARHLVLESAHPSPLSAYRGFFGCGHFKQANDWLAAQGRGAVDW
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggcacggaagaagattgttgagaaaggcgggaacggcgcgcagattccggcagaatgg
cttgcggctgttcccgcatttcggcagggggagcacctgcccgtgctcaaggcggttgcc
gcgcggcgcagcaagggggcggtctatccgcctgaagaactggtgttcaacgcgctgcat
ctagcttcgcccgaggctgtgcgcgtggtgattgtggggcaggacccctaccatggcccc
ggtcaggcgcacgggctttcgttctctgtgccggaagaggccattgctgctggggccaag
ttccccccgtccctgcgcaatatattcaaggagatagaggcggaatatccggataaagcc
gttgcctgtcagtcatcggatttgacccgctgggcgcggcagggtgttctgctgctgaac
tccacgctcaccgtggatgcgggcaaggccggttcccatgctgctctcggttggggcgca
attacagacggtatcatcgccacggtcagttcgctgtgcgcccccacggtcttcatgctc
tggggcagccacgcccagcagaaagccgcgctggttaattccgcgcggcatctggttctg
gaatctgcccacccctctccgctttccgcctatcgcggtttcttcggctgcgggcatttc
aaacaggcaaacgactggctcgctgcacagggcaggggggcggtagactggtaa
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