Desulfovibrio subterraneus: LN040_08960
Help
Entry
LN040_08960 CDS
T08953
Name
(GenBank) Ig-like domain-containing protein
Organism
dsb
Desulfovibrio subterraneus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_13
Glucodextran_B
Big_6
Cadherin
DUF4114
HemolysinCabind
Cadherin_3
BapA_N
Motif
Other DBs
NCBI-ProteinID:
WBF69200
LinkDB
All DBs
Position
complement(1963008..1971176)
Genome browser
AA seq
2722 aa
AA seq
DB search
MADSARPIVLTAPEAGVNVELHIDPAAVLQVEFDINSAMATRAGNDLVFSFENGGKLILI
DFIDIIANGQAPEFVLSDGTVVAGDALYASLGDIPLETAAGASAGGGGSTYIYEPGELLG
GFDSLLAQGSGGTVGGTGLQGGGGLGALGGGFGGAGAGGFGGGGLGTGGPLADTTAPDAP
VITRLAATSDTGVSNADRLTADITPLLQGTGEPGATVSIYAAGVGLLGTATVNGAGNWSF
ESPAFADGDIRYYATQADAAGNVSSSSNSLVVTVDTVATVDSVVSADIAGGTVNHAAIAD
GYDIEIKLDGTAKVGDKIIVTDASGTVHAPYELTAADIAAGKIGTTLNPALNGDGTIQQG
DQTITVRVEDAAGNSSEHTLTANFDTVATVDSVVSADIAGGTVNHAAIADGYDIEIKLDG
TAKVGDKIIVTDASGTVHAPYELTAADIAAGKIGTTLNPALNGDGTIQQGDQIITVRVED
AAGNSSEHTLTANFDTVATVDSVVSADIAGGTVNHAAIADGYDIEIKLDGTAKVGDKIIV
TDASGTVHAPYELTAADIAAGKIGTTLNPALNGDGTIQQGDQTITVRVEDAAGNSSEHTL
TANFDTVATVDSVVSADIAGGTVNHAAIADGYDIEIKLDGTAKVGDKIIVTDASGTVHAP
YELTAADIAAGKIGTTLNPALNGDGTIQQGDQTITVRVEDAAGNSSEHTLTANFDTVATV
DSVVSADIAGGTVNHAAIADGYDIEIKLDGTAKVGDKIIVTDASGTVHAPYELTAADIAA
GKIGTTLNPALNGDGTIQQGDQTITVRVEDAAGNSSEHTLTANFDTVSTVDSVVSADIAG
GTVNHAALSDGYDIEIKLDGTAKVGDKIIVTDASGTVHAPYELTAADIAAGKIGTTLNPA
LNGDGTIQQGDQTITVRVEDAAGNSSEHTLTANFDTVATVDSVVSADIAGGTVNHAAIAD
GYDIEIKLDGTAKVGDKIIVTDASGTVHAPYELTAADIAAGKIGTTLNPALNGDGTIQQG
DQTITVRVEDAAGNSSEHTLTANFDTVAPVFTDTSFSINENTTSNVVGTVVATDDAVGNP
AGEITYTFANGTGTSDDGFFHLGSAGTLTLTDAGLAARNAGQLLDYESGPRKAVMDVVAT
DAAGNATNQSVTVHINDVNEAPTVWLNNNLIINGSFEDGVNFGGSNWTKADSLPGWKNES
DTSMEPHKGSHMNVGTTDGDNYVDLGGSPGNAHISQTIEGLSDGETYTLQFSMFDKAFKA
GNADSGMLEVYWNGHLVATLHGDSASWSEVSLNLVADGTSGTLSFKEVGTSTDNHGIALD
NVRLFGTAGADVTVAEHVANGTVVATAAGSDVDAGDTLSFWLLDGEGNRVSTLNGFAINQ
TTGVVSVVDSNMIDYESATNHAITLKVVSFDGTENSVPQDLTVNIIDVPELVTVDEGSAV
ILTVADLSVSGESLAGHMLRLDGLPAGGDVQKWDAAADKWISLGNNAKFSYDDLAAGHIR
YSHAGGEDSSDVLRFDVLDSTGKVVLVDKASVNVAVNPINDAPVLDLDSTGQVEVIYNNS
GASYNNVLGVFTYDANGNPVFEQVILDHTRTDSGVDKGQFGSSLGSFDALEDLHFFILPN
GSKSWTGGSATEPNFVFQNGKWVLDVGNAKIPVFFSDQGLNSDNVDHFRIVTENGKLVVR
VEDVNGGGDRNYSDVVAEITPSGDADTDTGFAATFVEGKGAVAIVGDVRISDADNTHMKN
AVITLKDAVAGDTLSFEGDAPAGITVTIAPDGHSIILSGDALSSAYEQALKQIRYENSGN
IASGTTSREIDVAVTDADGASSGTATAVVTVVGVNDVLFTTSHQETQNPNYTNEFATQFD
QSGTKVVNGWDVTVGEAGGTDSISVDKWNGVKSVQATSSGDADVSINNFVHVDVNLGSAN
DSDTEGSSVTIQDAKRGNVTTGNDGDHITIHALTNDKPNTGWSDTFTIHTNDGDDTLDLV
GSGLKNQGGSTVFVVDAGSGNDTVNISGENYSLNINGGAGNDTITVSGSAAHSTLAGGDG
VDHVTVTGALAHSVVSGEDVDINGSVFNSTLTGEDITIGGALDFSSVSGGDITVGGSVSN
STLSGGTGDDTIRIGGNATNVTLSGGEGSDHITVVGNYSGPAIDGGSGDDFISIAGSTTG
AHLVGGIGNDELIAGSGTDTLTGGVGNDTMDGGAGYDTAILQGNFNEYRVTDLGDDGLRF
ERISDGAVVETDIIKNVENFTFGDKHDLNLTDVLNNAPSDVGMTRATGSASVLSTATLHL
DAHLADGAAPSTVHFSGDDMGGVGSWTDTAGIPNNAYAESATYDPHYDASALNGHGGISF
ANTDLIAAAGINIADRNDINSSLYDSGKSFAVVFETGAVDGSMQVVYDNGSVLGGYNIVI
GADNHLYAQIHGVQAFGSEATQIDLGLAQADTTYSVIVDHDKATNTLSVWCNGEDYSDSV
APGIHLFFSSDIGIGGANHGVYAPDHDFVYNDNTFKGSVGEVIQWNESLGNKVDDVQSYL
DQKWFASGDSLTVGAHDGMILGSLSAHDADNDPLTYSLSNDGGLVNLVSAGSEHHIVLNT
LVDSGMHDIRFDVTATDSHAASHSERFIVDVNDPSGTISLGAADTGHDVTIIGLDKGEKL
DLSQLLQDEHRDTLDQYLHFSTETEGGSTNTLITVDVHGGGNFGAGSQQITLVGVDMTSG
GHVDSASILNDLLANGKLVTDL
NT seq
8169 nt
NT seq
+upstream
nt +downstream
nt
atggcggattccgcacgtcctatcgttttgactgcgcccgaagctggagtaaatgttgag
ctgcatatagatcctgctgcagtgctgcaagtcgaatttgatattaattcggcaatggcc
acccgtgcagggaatgacctcgtgttctcgttcgagaacggcggcaaacttatcctgatt
gacttcatagacatcattgcaaacggacaggcgcctgagtttgttctcagcgacggtacc
gttgtggccggtgatgccctgtatgcctctctgggcgatattcctcttgaaactgccgca
ggtgcctctgcgggcggtggtggttccacctatatttacgaaccgggcgaattgctcggg
ggctttgattcgcttcttgcgcaaggcagcggtggaaccgttggcggtaccggtctgcag
ggtggcggcgggttgggtgccctcggtggtggctttggcggcgctggtgcaggtggtttt
ggcggaggcggtttgggtacgggtggtcccttggctgacaccactgctcctgatgctccg
gttattacccgtcttgcagccacatcagataccggtgtgagcaatgccgaccggcttacg
gcggatataactcctcttttgcagggaactggcgagcccggagctacggtatccatttat
gccgcgggtgttgggttgcttggaacggcaacggtaaatggcgcgggtaactggtccttt
gaatctcccgccttcgctgatggcgatatccggtattatgcaacacaggcagatgccgca
ggcaatgtttcttccagctccaactcccttgtagtgacagtagacacggttgccacggtc
gattccgtggtgtctgcggatatcgcaggcggcacggtgaaccacgccgcgattgccgac
ggctacgacatcgagatcaagctggatggcactgcgaaggtcggtgacaagatcatcgtc
acggatgcatccggcaccgtccacgctccgtatgaactgacggctgcagatatcgccgca
ggcaagatcggcaccacgctgaatcctgccctgaacggtgacggcaccatccagcagggt
gaccagaccatcaccgtgcgtgtggaagacgccgcgggcaacagctccgagcatactctg
actgccaattttgacacggtcgccacggtcgattccgtggtgtctgcggatatcgcaggc
ggcacggtgaaccacgccgcgattgccgacggctacgacatcgagatcaagctggacggc
actgccaaggtcggtgacaagatcatcgtcacggatgcatccggcaccgtccacgctccg
tatgaactgacggctgcagatatcgccgcaggcaagatcggcaccacgctgaatcctgcc
ctgaacggtgacggcaccatccagcagggtgaccagatcatcaccgtgcgtgtggaagac
gccgcgggcaacagctccgagcataccctgaccgccaattttgacacggttgccacggtc
gattccgtggtgtctgcggatatcgcaggcggcacggtgaaccacgccgctattgccgac
ggctacgacatcgagatcaagctggacggcactgcgaaggtcggtgacaagatcatcgtc
acggatgcatccggcaccgtccacgctccgtatgaactgacggctgcagacatcgccgca
ggcaagatcggcaccacgctgaatcctgccctgaacggtgacggcaccatccagcagggt
gaccagaccatcaccgtgcgtgtggaagacgccgcgggcaacagctccgagcataccctg
accgccaattttgacacggtcgccacggtcgattccgtggtgtctgcggatatcgcaggt
ggcacggtgaaccacgccgcgattgccgacggctacgacatcgagatcaagctggacggc
actgccaaggtcggtgacaagatcatcgtcacggatgcatccggcaccgtccacgctccg
tatgaactgacggctgcagatatcgccgcaggcaagatcggcaccacgctgaatcctgcc
ctgaacggtgacggcaccatccagcagggtgaccagaccatcactgtgcgtgtggaagac
gccgcgggcaacagctccgagcataccctgaccgctaattttgacacggtcgccacggtc
gattccgtggtgtctgcggatatcgcgggcggcacggtgaaccacgccgcgattgccgac
ggctacgacatcgagatcaagctggacggcactgccaaggtcggtgacaagatcatcgtc
acggatgcatccggcaccgtccacgctccgtatgaactgacggctgcagatatcgccgca
ggcaagatcggcaccacgctgaatcctgccctgaacggtgacggcaccatccagcagggc
gaccagaccatcaccgtgcgtgtggaagacgccgcgggcaacagctccgagcataccctg
accgccaattttgacacggtttccacggtcgattccgtggtgtctgcggatatcgcaggt
ggcacggtgaaccacgccgcgctttccgacggctacgatatcgagatcaagctggacggc
actgccaaggtcggagacaagatcatcgtcacggatgcatccggcaccgtccacgctccg
tatgaactgacggctgcagatatcgccgcaggcaagatcggcaccacgctgaatcctgcc
ctgaacggtgacggcaccatccagcagggtgaccagaccatcactgtgcgtgtggaagac
gccgcgggcaacagctccgagcataccctgaccgctaattttgacacggtcgccacggtc
gattccgtggtgtctgcggatatcgcgggcggcacggtgaaccacgccgcgattgccgac
ggctacgacatcgagatcaagctggacggcactgccaaggtcggtgacaagatcatcgtc
acggatgcatccggcaccgtccacgctccgtatgaactgacggctgcagatatcgccgca
ggtaagatcggcaccacgctgaatcctgccctgaacggtgacggcaccatccagcagggt
gaccagaccatcaccgtgcgtgtggaagacgccgcgggcaacagctccgagcataccctg
accgccaattttgacacggtcgcgcctgtctttactgacacttcattctccatcaacgag
aacaccaccagcaatgtcgtgggtacggttgtggcgactgacgatgctgtcggcaatccc
gcaggcgaaataacctatacgtttgccaacggcactgggaccagcgatgacggcttcttc
catctgggttcagctggcacgcttactcttactgatgccggcttggccgcccgcaatgcc
ggtcagctcctcgactacgaaagtggcccccgcaaggcggtgatggatgttgttgcaaca
gatgccgcaggcaacgccaccaatcagtccgtgacggtacacatcaatgatgtgaatgaa
gcaccgaccgtctggctgaataataatctcatcatcaacggcagctttgaagacggcgtg
aactttggcggttccaactggaccaaggccgactcgctgccgggctggaagaacgaatcc
gatacctccatggagccccataagggcagccatatgaacgtcggcacgactgacggtgat
aactatgtggaccttggcggttcgcccggtaacgcccatatctcgcagactatcgaaggg
ctttccgacggcgagacttatacgctgcagttctccatgtttgacaaggcattcaaggca
gggaatgcggattccggcatgctggaagtctactggaacggccatcttgtggcgacgttg
catggtgattcggcatcgtggtctgaggtgagcctcaatctggtggcggatggtaccagc
ggtactctttcgttcaaggaggtaggcacctccaccgacaaccacggcatagcactggac
aacgtccggctgttcggcaccgccggggctgatgttaccgtggccgagcatgttgccaac
ggcacagttgtggctaccgctgccggatctgacgtggacgcaggcgacaccctctctttc
tggttgcttgatggtgaaggaaacagggtgagcaccctgaatggcttcgctatcaaccag
acaaccggggttgtttccgtcgtcgattcaaacatgatcgattacgaatctgccaccaac
catgccatcacgctcaaggtcgtctcttttgatggcacggagaattctgttccgcaggac
cttacggtcaatattatcgatgtacctgaactggtcaccgtggatgagggaagcgctgtt
attcttacggttgccgatctttccgtttccggcgaatcgttggcggggcatatgttgcgt
cttgatgggctgcccgccggtggtgatgtgcagaagtgggatgccgctgctgataaatgg
atttctctgggcaataacgcgaagttctcttacgacgatcttgccgcagggcatatccgc
tactcccatgcgggcggcgaagattccagcgacgttttgcgcttcgatgttctcgacagc
accggcaaggtggtgctggtagataaggcaagcgtcaatgtggcggttaatcccataaat
gatgctcctgtccttgatcttgattccacaggccaggttgaggttatctacaataattcc
ggggcttcgtataataatgtgctcggcgttttcacctatgatgccaatggcaaccctgtg
ttcgagcaggtgatccttgatcacacccgcacggatagtggtgtggataagggccagttc
ggttcctcgctcggcagcttcgatgcgctggaagacctgcacttcttcatcctgcccaac
ggttccaagtcgtggaccggcggttccgcaaccgagcccaatttcgtgttccagaacggc
aagtgggtgctggatgtgggtaacgccaagattccggtgttcttcagtgatcagggcctc
aactctgataatgtggaccatttccggatcgtgaccgagaacggcaagcttgtcgttcgg
gtggaagatgttaacggcggtggagaccgtaactacagcgacgtagttgccgagattacg
cccagcggagatgccgatactgatacgggatttgccgcaacctttgtggaaggcaaggga
gccgtggccatcgtgggcgacgtgcgcatctcggatgcggacaacacgcatatgaagaac
gccgtgattacccttaaggacgccgttgccggcgacaccctgtcgtttgagggcgatgca
cccgcaggcataaccgtgactattgctcctgacgggcacagcatcatcttgagcggcgat
gcgctttccagcgcttatgagcaggctctcaagcagattcgttacgaaaattccggcaat
attgcttccggtaccacctctcgcgaaatcgacgtggcggtgaccgatgcggacggtgct
tcaagcggcacagccacggctgtggttaccgttgtgggcgtaaacgatgtgctctttacc
accagtcatcaggaaacccagaatccgaattatacgaacgagttcgccactcagtttgat
cagagcggtaccaaggttgtgaacggctgggatgtgaccgtgggcgaagctggcggaact
gacagcatttccgtggacaaatggaatggcgtgaagagcgtgcaggccacatcgtccggc
gatgcagatgtttccataaacaacttcgttcatgttgacgtgaaccttggctcggcaaat
gacagcgataccgagggcagctccgtaacaattcaggacgccaagcgcgggaacgtgacc
accggcaatgacggtgaccatattaccatccatgcgctgaccaacgacaagccgaatacc
ggctggtccgataccttcaccatccacaccaatgatggcgatgatacgctggacctcgtg
ggctccggtctgaaaaatcagggtggcagcacggtctttgtcgtggatgcgggcagcggt
aacgacaccgtgaacatttccggtgagaactacagcctgaacatcaacggcggtgctggc
aacgataccataaccgtttccggcagtgcagcgcacagcacgcttgccggcggcgatggc
gtagaccatgtgaccgtgaccggcgccttggcgcacagcgttgtcagcggtgaagatgtg
gatataaacggcagcgtgttcaacagcacgctgaccggcgaagatatcactatcggcgga
gcgctggacttcagctctgtatccggcggtgacataaccgtgggcgggtctgtatccaac
agcaccctttccggcggtaccggagacgataccatccgcatcggtggcaatgccactaac
gtgactctgtccggtggggaaggaagcgatcacataaccgtggtgggcaactactccggc
cctgccatcgacggtggttccggtgacgacttcatatccatcgcgggctccacaaccgga
gcgcaccttgtgggcggtatcggtaatgatgagcttatcgccggaagcggaacggatacg
ctgaccggcggtgtcggcaacgacaccatggacggcggagcagggtatgataccgccatt
ctccaaggcaacttcaatgaatatcgtgtgaccgaccttggtgatgacggcctgcgtttt
gagcggatttccgacggagccgttgtggaaaccgatatcatcaagaacgttgaaaacttc
acctttggtgacaagcatgacctgaatctgacggatgtgctgaacaatgctccgtcggat
gtgggtatgacccgcgcaacgggttctgcttccgtgctcagcactgcgacgctgcatctg
gacgcccatctggcagatggggctgcgccttctaccgttcatttcagtggagacgatatg
ggcggcgtgggtagctggactgatactgcaggcatcccgaacaacgcctatgcggagagt
gccacctatgacccccattatgacgcatccgcgctgaacgggcatggcggaatatccttt
gcgaataccgatctcattgctgctgcaggtatcaatatcgcggacaggaatgatatcaac
tccagtctgtatgactccggtaagtcgtttgccgttgtctttgaaaccggagccgtggat
ggttccatgcaggttgtctacgataacgggtcggtcttgggtggctataatatcgtgatc
ggggcagataaccatctctacgcccaaatccacggtgttcaggcttttggaagcgaagct
acccagatagatcttggtctggcacaggcggacaccacgtattcggtgatcgtagatcac
gataaggcaacgaatacgctttctgtctggtgcaacggggaggattattccgactcggtt
gctcctggtattcatctcttcttctcgtctgatatcgggattggaggagccaaccacggc
gtgtatgcgccggaccatgactttgtgtataatgacaacaccttcaagggctctgtcggc
gaagtcatccagtggaatgagtcacttggtaacaaggtggatgacgttcagtcgtacctt
gaccagaagtggtttgcctcgggtgacagcctgaccgtgggcgcgcatgatggcatgatt
ctcggttccctttccgcccatgatgcggacaacgacccgctgacttacagcctgagcaat
gatggcggcctggtgaacctggtgtccgccggtagcgagcatcatatcgtgctcaacacg
cttgtcgattcgggcatgcatgatatccgcttcgatgtaacagcgacggattctcatgca
gcctcgcattcggagcgcttcattgttgatgtcaacgatccctccggtaccatttcgctt
ggcgctgcggacacgggacacgatgtgaccatcattggtctggataagggcgagaagctt
gatctgagtcagctgctgcaggacgagcacagagatactctggaccagtatctgcacttc
tcgaccgagaccgaaggcggcagcaccaacacgctgattactgttgatgtgcatggcggc
ggcaactttggtgccggttcccagcagattacgctggtcggagtggacatgacctccgga
ggtcatgtggactctgcatccatcctgaatgacctgcttgccaacggcaagctcgtgact
gacctgtag
DBGET
integrated database retrieval system
