Desulfovibrio subterraneus: LN040_08965
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Entry
LN040_08965 CDS
T08953
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LN040_08965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsb02000
]
LN040_08965
02044 Secretion system [BR:
dsb02044
]
LN040_08965
Transporters [BR:
dsb02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LN040_08965
Secretion system [BR:
dsb02044
]
Type I secretion system
Adhesin protein transporter
LN040_08965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
Peptidase_C39
SMC_N
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WBF69201
LinkDB
All DBs
Position
1971812..1974205
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AA seq
797 aa
AA seq
DB search
MSEMNSRTEQTDNDETTAGSSAKPDAARDMTTPDTDGQAEALQQPEAGPDSHEDESVPSP
KDASDASDGLQGSSAIPWKTIAPAPADVDYESPLLRCLVVLFSLHGRTISIEKLKGGLPE
HGGPSHTSACLRAAMQAGMNVRAVHRQKLENISTLTLPCILLLKTKGACVLTGLNDKTAE
IIFPETGGTPIEILRYKLEEEYAGYAIFGKVEGRLDKRASEIKLLKAKRWFWGTIWHYLP
IYKHVGVASLVINLLAIVSPLFFMNVYDRVVPNNALDTLWVLAIGIAIAYLFDFILRNLR
SYFCDVAGKNADIILASRLMQHLMSIRLDNKPDSTGTLANNLREFESLREFFSSTTLLAI
IDLPFLFVFIALVGFIGGPMLFVPALAVPLVVIIGWLLQYPLQRAIESGYKEGAQKNALL
IEILNGIETVKTSQAEGRMQRMWERVVGMSARSNSHTKTLANFSITMSMLAAQLVSMIII
VWGVHRIGAGDLTMGGLIACNILAGRAMAPLSQVAAMLSRLQQSRMALKSLDLLMTLPTE
RADDSASLCYVGLAPSLAAEELSFRYPGNERLALENVNFLFRPGEKIGIIGKMGSGKSTL
GKLIVGLYQPTEGAVKLGGVDIRQMDVAELRSRAGYVSQDNYLFYGNVRENIAISNPNAD
DNAILRAATIAGVTDFVQAHPAGFGMPVGERGMALSGGQRQSVALARALLNDPEILILDE
PSSNMDNGAEFQFKHRLATIIKDKTLVLITHRMSMIDLVDRLVVMDSGRIIADGPKAAVL
NALKNEQLRAAAKPRTM
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagatgaattccagaaccgaacagaccgacaacgatgaaacaacagcgggcagc
tccgcaaaacctgatgctgcccgcgacatgacaacgcccgacacagacgggcaggcggaa
gccctccagcagcctgaagccggaccggactctcatgaagacgaatccgtcccttcaccc
aaagacgcttcagacgcatcggatggactgcaaggcagctctgccataccatggaaaacc
attgctccggcaccggcagatgtggattatgaatcccccctgctgcgatgccttgtggtg
cttttttccctgcacgggcgcaccatatccatagagaaactcaagggcggcctgccggaa
catggtggcccttcgcacacgtcagcctgcctccgtgctgccatgcaggccggtatgaac
gtgcgggccgtgcacaggcagaagctggagaacatatccaccctcaccctgccgtgcatt
ctgctgctcaagaccaagggagcctgcgttcttaccgggctcaatgacaagacggcggaa
atcatctttccggaaaccggcggcacccccattgaaatcctccgctacaagctggaagag
gaatatgcgggctatgccatcttcggcaaggttgaaggcaggctggacaaacgcgccagc
gagataaaactgctcaaggccaagcgctggttctggggcaccatctggcattacctgccc
atatacaagcatgtgggcgttgccagccttgtgatcaacctgctggccattgtctcgccg
ctctttttcatgaacgtgtatgaccgggtagtacccaacaatgcgcttgataccctttgg
gtgctggccataggtattgccattgcctacctgttcgactttatcctgcgcaatctgcgc
agctacttctgcgacgtggccggcaagaatgcggacataattctcgcctcacgactcatg
cagcatctcatgagcatccggctggacaacaagccggactccaccggcacgcttgccaac
aacctgcgtgaattcgaatccctgcgcgaatttttcagttccaccacgctgcttgccatc
atcgacctgcccttcctgttcgtgttcatcgcgctggtgggcttcataggcggccccatg
ctcttcgtgcctgctcttgcggttccgctggtcgtcatcatcggctggctgctgcagtat
ccgctgcagcgggccattgaatccggctacaaggaaggtgcgcagaaaaacgccctgctc
atcgagattctcaacggcatagaaaccgtcaagaccagtcaggcagagggccgcatgcag
cgcatgtgggaacgggtggtcggcatgagcgcccgctccaacagccacaccaagaccctt
gccaacttctccataaccatgtccatgcttgccgcacagctggtgagcatgatcatcatc
gtctggggtgtgcaccgcatcggcgcgggcgacctgaccatgggcggactcatcgcctgc
aacatcctcgctggccgtgccatggccccgctcagccaggtggcagccatgctttcgcgc
ctgcagcagtcacgcatggcgctcaaatcgctcgacctgctcatgaccctgcccaccgaa
cgggcggacgacagcgcatcgctctgctacgtgggccttgccccgtcccttgccgccgag
gaactgagtttccgctatcccggcaacgaacggctcgcgctggaaaacgtcaatttcctg
ttccgtcccggtgaaaagatcggcatcatcggcaaaatggggtccggcaaaagtacgctg
ggcaaactcattgtcggcctgtaccagcccaccgagggtgccgttaaactcggcggggtg
gacatccggcagatggacgtggccgaactgcgcagccgcgcgggctacgtctcgcaggac
aactaccttttctacggcaacgtgcgcgagaacattgccatcagcaaccccaatgccgac
gacaacgccattctgcgcgcagccaccattgccggtgtcaccgactttgtgcaggcacat
ccggcaggcttcggcatgcctgtgggcgaacggggcatggcgctttcaggcgggcagcgg
caatccgttgcgctggcccgcgccctgctgaacgatccggaaatcctcattctcgacgaa
cccagctccaacatggacaacggtgctgaattccagttcaagcaccgccttgccactatc
atcaaggacaagacgctggtgctcatcacccaccgcatgagcatgatagacctcgtcgac
cggcttgtggtcatggacagcgggcgcatcatcgcggacggccccaaggccgcagtgctg
aacgcgctgaagaacgaacagctgcgcgcagcagccaagccccgcaccatgtaa
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