Desulfovibrio subterraneus: LN040_09205
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Entry
LN040_09205 CDS
T08953
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb02020
Two-component system
dsb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LN040_09205
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LN040_09205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsb03021
]
LN040_09205
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
dsb02035
]
LN040_09205
Transcription machinery [BR:
dsb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LN040_09205
Bacterial motility proteins [BR:
dsb02035
]
Flagellar system
Flagellar assembly proteins
Stator
LN040_09205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Alpha-E
UPF0122
GerE
DUF3562
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
WBF69324
LinkDB
All DBs
Position
2027134..2027949
Genome browser
AA seq
271 aa
AA seq
DB search
MEISSSSGKSSSSGNSPASGTEPWELLETGAVAWVDMSPRQQESVVRHYAPKIKFLALRL
KAKLPKNVELGELISAGTLGLMESLGKFDPKMGIKFDTYAESRIRGAMLDELRRLDWFPR
SLRHRVRQLEEAIHKIENDKGRIPTEEELQQATGLDEKDVRTGLEALQNQLCLSLDAIQE
TFSTEGRDSIDGEPFQATALQELIERVASLIDQLTPREKLVLSLYYSDELNMRETAEVMG
ITEGRVSQLHTQALQRLRREFHTSYGNTESI
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatcaagttcttctggaaaaagctcctcttcaggcaatagtcccgcaagcggc
actgagccgtgggaactgcttgagaccggtgccgttgcgtgggtggacatgtctccccgc
cagcaggagtccgttgtccggcactatgcacccaagatcaagttccttgccctgcgcctg
aaggccaaactgcccaagaacgtggaactgggcgaactcatcagtgcgggtacgctcggg
ctgatggaatcgctcggcaagttcgatcccaagatgggcatcaagttcgatacctacgcg
gaaagccgaatccgcggtgccatgcttgacgaactgcgaaggctggactggttcccccgc
agcctgcggcacagggtacggcagcttgaagaagccattcataagatagaaaacgacaag
ggccgcatccccaccgaagaagaactgcagcaggccaccggactggacgaaaaagatgtc
cgcaccggactggaggcactgcagaaccagctatgcctgagccttgacgccattcaggaa
acattttccaccgaaggccgcgattccatagacggagagccctttcaggccacagcactt
caggaactgattgaaagggttgcgtcacttatcgatcaattgacacctagggaaaagctg
gtattgtcactctattatagtgacgaattaaatatgcgtgaaaccgccgaagttatgggc
ataaccgagggccgcgtatctcagttgcatactcaggctctgcagcggttgcgccgggaa
ttccatacatcgtatggcaacaccgaaagcatttaa
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