Desulfovibrio subterraneus: LN040_10155
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Entry
LN040_10155 CDS
T08953
Symbol
cutC
Name
(GenBank) choline trimethylamine-lyase
KO
K20038
choline trimethylamine-lyase [EC:
4.3.99.4
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LN040_10155 (cutC)
Enzymes [BR:
dsb01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.4 choline trimethylamine-lyase
LN040_10155 (cutC)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PFL-like
Gly_radical
MIP-T3
Motif
Other DBs
NCBI-ProteinID:
WBF66093
LinkDB
All DBs
Position
complement(2259584..2262124)
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AA seq
846 aa
AA seq
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MDLHDFSTKLAEATKNLTPTERASLKKIFEGVSAELTGKAPVAKADDHHEGCGIPDGPTE
RHLKLKEKFLTHVPSVTIHRARAITKIAKENPGIPAALLRAKTFRYCCETAPLVIQDHEL
IVGSPNGAPRAGAFAPDVAWRWLRDEMESIGTRAQDPFYISEEDKKILRDEIFPFWENKS
VDELCEGQYREAGLWEMSAESYVSDCSYHAVNGGGDSNPGYDVILMKKGMLDIQHEAQEH
LDHLDYANPDDIDKIYFYKSVIETAEGVMIYAKRLSQYAYELASKESDPKRKAELLKISE
INARVPAHAPSNFWEAIQAVWTVESLLVVEENQTGMSIGRVDQYMYPFYRADIDSGRMTD
YEAFDLAGCMLVKMSEMMWLTSEGASKFFAGYQPFVNMCVGGVTREGHDATNDLTYLLMD
AVRHVRIYQPTLATRVHIKSPQKYLKKIVDVIRSGMGFPAVHFDDAHIKMMLAKGVSMED
ARDYCLMGCVEPQKSGRLYQWTSTGYTQWPICIELVLNHGVPLWYGKQVTPDMGDLSQFD
TYEKFEEAVKYQIKWITKNTSIATVISQRVHRDLAPKPLMSLMYEGCMEKGRDVSGGGAM
YNFGPGVVWSGLATYVDSMAAIKKLVYDEKKYTLQQLNDALKVDFVGYDQIKADCLAAPK
YGNDDDYADMIAADLVHFTEVEHRKFKTLYSVLSHGTLSISNNTPFGQLLGASANGRQAW
APLSDGISPTQGADYKGPTAIIKSVSKMANDNMNIGMVHNFKLMSGLLDNPEGENGLITL
IRTACMLGNGEMQFNYLDNDTLIDAQKHPEKYRDLVVRVAGYSAFFVELCKDVQDEIISR
TMLHSI
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
gtggatcttcacgatttttcgaccaaactcgcagaggcgaccaagaacctgactcccaca
gagcgggcttcgctgaagaagattttcgaaggcgtttccgcagaactgacgggcaaggct
cctgttgccaaagctgatgaccaccatgaaggctgcggcattccggatggtcccaccgag
cgtcacctcaagctgaaggaaaagttcctcacgcatgtgcccagcgttaccattcaccgt
gcccgcgcaatcaccaagattgccaaggagaatcccggtatccccgctgcgctgctgcgt
gccaagaccttccgctactgctgcgaaaccgcaccgctggtgattcaggaccacgaactc
atcgtcggttcgcccaacggcgcaccccgcgccggtgcctttgcccccgacgtggcatgg
cgctggctgcgtgacgaaatggaaagcatcggcacccgtgctcaggaccccttctacatc
tccgaagaagacaagaagatcctgcgcgacgaaatcttccccttctgggaaaacaagtcc
gttgatgagctgtgcgaaggccagtaccgcgaagcaggcctgtgggaaatgtccgcagaa
tcctacgtttccgactgctcctaccacgcggtgaacggcggtggcgactccaaccccggt
tacgacgtcatcctgatgaagaagggcatgctggacattcagcatgaagcgcaggagcac
cttgatcatctggattacgcaaaccccgacgacatcgacaagatctacttctacaagtcc
gtcatcgagactgcagaaggcgtgatgatctatgccaagcgcctgtcccagtatgcctac
gaactggcatccaaggaaagcgatcccaagcgcaaggctgaactgctgaagatttccgaa
atcaacgcccgcgtgcctgcccatgctcccagcaacttctgggaagccattcaggctgtc
tggaccgtcgagtctctgctcgtggttgaagaaaaccagaccggcatgtccatcggccgc
gttgaccagtacatgtatcccttctaccgcgcagacatcgattccggtcgcatgaccgat
tacgaagcctttgaccttgccggttgcatgctcgtgaagatgtccgaaatgatgtggctc
accagcgaaggcgcttccaagttctttgccggctaccagcctttcgtgaacatgtgcgtg
ggcggcgttacccgtgaagggcatgacgccaccaacgatttgacctacctgctcatggac
gcagtgcgccacgtgcgtatctaccagcccacgctggcaacccgtgtgcacatcaagtcc
ccgcagaagtatctgaagaagatcgtggacgttatccgctccggcatgggcttccctgcc
gtgcactttgacgatgcccacatcaagatgatgctcgccaagggcgtaagcatggaagat
gcccgcgactactgcctcatgggttgcgttgaaccccagaagtccggccgtctgtaccag
tggacctccaccggctacacccagtggcccatctgcatcgagctggtgctcaaccacggc
gtgccgctgtggtacggcaagcaggttacccccgatatgggcgacctgagccagttcgac
acctacgagaagtttgaagaagccgttaagtaccagatcaagtggatcaccaagaacacc
agcatcgctactgttatctcccagcgtgtgcaccgtgatctggcacccaaaccgctcatg
tccctgatgtacgaaggctgcatggaaaagggccgcgacgtttccggcggcggcgccatg
tacaacttcggccccggcgttgtgtggagcggtctggccacctacgtggactccatggct
gccatcaagaagctggtttacgacgagaagaagtacaccctgcagcagctgaatgatgcg
ctgaaggttgactttgtgggctacgaccagatcaaggccgactgccttgccgcacccaag
tacggcaacgacgacgactatgccgacatgatcgctgcggatctcgtgcacttcaccgaa
gtggagcaccgcaagttcaagaccctgtactccgtgctcagccatggcacgctgtccatc
tccaacaacaccccctttggccagctgcttggcgcttccgccaacggccgccaggcatgg
gcgccgctttccgacggcatcagccccacgcagggtgcggactacaagggccccacggcc
attatcaagtccgtttccaagatggccaacgacaacatgaacatcggcatggtgcataac
ttcaagctgatgtccggcctgctggacaaccccgagggcgaaaacggtctgatcaccctg
atccgcaccgcctgcatgctcggcaacggcgaaatgcagttcaactacctggacaacgac
acgctgatcgatgcgcagaagcatcctgaaaagtatcgcgatctcgttgtgcgcgtggct
ggctacagcgccttcttcgtcgaactctgcaaggacgttcaggacgaaatcatcagccgt
accatgctgcattcgatctaa
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