Desulfovibrio subterraneus: LN040_10435
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Entry
LN040_10435 CDS
T08953
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsb03009
]
LN040_10435
Enzymes [BR:
dsb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
LN040_10435
Ribosome biogenesis [BR:
dsb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LN040_10435
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
WBF66144
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All DBs
Position
2324558..2325667
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AA seq
369 aa
AA seq
DB search
MATVLHITVTPEESGQKLLQFLQRRLGKDVPKAAIMRWIRTGQVRLNKGRVKPFDRLDAG
DIVRVPPFHSDTASVHCDSHNDNGATAADGISPNPIVPSATQDGVGRLAKAGLPVAATAE
GLLILRKPAGLPVQPGTGHTDAVTTRLAACFANAPFMPTPAHRLDRDTSGLLLVATSYAR
LQSLHTLFRNEHAIGKYYLAWVQGDWPDSGPRTLHDTLAKRATSQEPEGTGTGGRGREKV
LRLNTAENHSAAQGNRKGAETAKEASCTVVPVLRTGKTTLLAIRLHTGRTHQIRVQLSGR
GFPILGDRKYGGPACPQGMLLHAWKLVLPGLAPESDRPEDFATDQAFTCLPEWTAPFTIT
DDDLAGCSF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggccacggtactgcacatcactgtcactccggaggaatccggccaaaaactgctgcaa
ttcctgcaacgcagactgggcaaggatgtccccaaggccgccatcatgcgctggatacgc
accggccaggtgcgcctgaacaaggggcgggtaaagccctttgacaggcttgatgcgggt
gacatcgtccgcgttcccccctttcattccgacaccgcctccgtgcactgcgactctcac
aacgataacggagccacagcagcagacggcatatcccccaatcctatcgttccctctgca
acgcaggacggcgtcggacggcttgccaaggccggactccccgttgccgcaacggctgaa
ggcctgctgatactccgcaaaccggccggactgcccgtccagcccggaacgggccatacg
gatgccgtaaccaccagacttgccgcctgtttcgcaaacgctcccttcatgcccactccg
gctcacaggctggacagagatacatccggccttctgctggtagccaccagctatgcacgc
ctgcagtcgctgcacaccctgttccgcaatgaacacgccatagggaaatactatctcgcg
tgggtgcagggcgactggccggatagcggcccgcgtactctgcatgacactctggccaag
cgcgccacttctcaagagccggaagggaccggtacgggtgggcgaggacgggaaaaagtg
ctgcgcctgaacaccgcagaaaaccattccgccgcccaaggcaatcgcaagggagcggaa
acagccaaagaggcatcctgcacggtggttccggtgttacgtaccggcaagaccacactg
cttgccattcgtctgcatacgggcaggacccatcagatacgcgtgcagctttcaggacgc
ggtttccctattctcggcgaccgcaagtacggcggccccgcctgtccgcagggcatgctg
ctgcacgcatggaagcttgtattgcccggccttgctcccgaatccgaccggccggaagac
ttcgccacggatcaggcattcacctgcctgccggaatggacagcgccgtttaccatcact
gatgatgaccttgccggctgttcattctag
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