Desulfovibrio subterraneus: LN040_11300
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Entry
LN040_11300 CDS
T08953
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb03030
DNA replication
dsb03430
Mismatch repair
dsb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LN040_11300 (dnaX)
03430 Mismatch repair
LN040_11300 (dnaX)
03440 Homologous recombination
LN040_11300 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsb03032
]
LN040_11300 (dnaX)
03400 DNA repair and recombination proteins [BR:
dsb03400
]
LN040_11300 (dnaX)
Enzymes [BR:
dsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN040_11300 (dnaX)
DNA replication proteins [BR:
dsb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LN040_11300 (dnaX)
DNA repair and recombination proteins [BR:
dsb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LN040_11300 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
TIP49
AAA_5
AAA_19
AAA_14
ResIII
AAA_30
AAA_18
TsaE
TniB
Motif
Other DBs
NCBI-ProteinID:
WBF66314
LinkDB
All DBs
Position
complement(2569147..2571285)
Genome browser
AA seq
712 aa
AA seq
DB search
MSTASLTTAYRPQTFADVAGQETIKAILSRAAREDRIAPAYLFSGTRGVGKTTIARIFAK
SLNCVNAPAAEPCNVCEHCRKITQGMHVDVVEIDGASNRGIDDARRLRESIGYAPMEGRY
KVFIIDEAHMLTRESFNALLKTLEEPPRGVTFIMATTEPHKFPITIISRCQHYIFKRLGE
HELEAHLTKILGREERDFEPQAVKLIARRAAGSVRDSMSLMGQVLALGHDKLEESSVRSI
LGLAGQELFFKVMEAMKAQDVVAVSSVIRSILDQGVDIGYFLRELATTWRNLFMLKQAGE
QALPLLDLPEAEARQWLEWVPEFELAHVHACWQLTLEGQRRVLTSLEPAMALELLLLNLT
FLPKLLNMEQLSRGGAKPAPQQSAQPQAQSGAPRPAGQGTPQGRGPTNPFDAAAGAAIQS
GDQSDAPSAATGTAPSFSGNRNEAPVSAPAGQASHGKRPEPPHRQRAAQAAAARENAAPA
YMPSGGMPSGNTSGNLSGSMPSGNVSSGEDSGPPAGYLDGPPPDLPPEFGGAEGVGGPQP
EPQDIYGGADMPGSSDSYAAAGSYATTYPYGAQEEAAPSAVPAVLDPASYDGPRDWDTFL
GFCKQQNGEGGRSVNILHSAKGEFTEGELRIRTQSGIQYGRLNEPGLVAVLTERARQWFG
PQTRLAVLEPTSRVRPYAELRKEVEDHPLSRMLEEELGAALIHFRHKDEPGK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcatctctgaccacagcataccgtccgcaaacctttgccgatgtggcgggg
caggaaaccatcaaggccatcctctcccgcgcggcacgagaagaccgcatagcacccgct
tatctgttcagcggcacccgcggcgtgggcaagacaaccattgcccgcatattcgccaag
tcgctgaactgcgtgaacgcgcccgcggcagaaccctgcaacgtgtgcgagcactgccgc
aagatcacgcagggcatgcatgtggacgtggtggaaattgacggcgcttccaaccgcggc
atcgacgatgcccgccgcctgcgcgaatccatcggctatgcgcccatggaaggccgctac
aaggtcttcatcatcgacgaagcgcacatgctcacccgcgaatcgttcaacgcgctgctc
aagacgctggaagagcccccaaggggcgtgactttcatcatggccaccacggagccgcac
aaatttcccatcaccatcatcagccgttgccagcactacatattcaagcgtcttggcgag
catgagctggaagcgcacctcaccaagattctgggcagggaagagcgcgatttcgaaccg
caggccgtgaagctcattgcccgccgtgcggccggttccgtgcgcgattcaatgtcgctc
atggggcaggtgctggctctggggcatgacaagctggaagaaagctctgtgcgctccatt
ctcggccttgccggtcaggaattgttcttcaaggtcatggaggccatgaaggcacaggat
gtggtggcggtttcttccgtcatccggtccattctcgatcaaggggtggatatcggctac
ttcctgcgcgaactggccaccacgtggcgcaacctcttcatgctcaagcaggccggagag
caggcgctgcccctgctggacctgcccgaggcggaagcccgccagtggctggagtgggtg
ccggaatttgaacttgcgcacgtgcatgcctgctggcagctcacactggaaggccagcgc
agggtgctcaccagccttgaaccggccatggcgctggaactgctgctgctgaacctgacc
ttcctgcccaagctgctgaacatggaacaactttcgcgcgggggggccaagcctgccccg
caacagtctgcccagccccaggctcaatccggtgcgccaaggcccgcagggcaggggaca
ccgcagggcagagggccgacaaacccttttgatgccgcagccggtgccgcgatccagtcg
ggcgatcagtccgatgcaccgtctgccgcaaccggaacagctccttccttctccggcaac
cggaacgaggctcctgtttctgcacctgcagggcaggcttctcatggcaagcgtccggag
cctccgcaccggcagcgcgctgcgcaggctgcggcggcccgtgagaatgccgcacccgcg
tatatgccgtccggagggatgccttccggtaacacgtcgggcaacttgtcgggcagcatg
ccttccggcaatgtgtcttccggcgaggattccggcccgcccgcaggctatctggatggt
ccgccaccggacctgccgccggaattcggcggtgcagaaggcgtgggcggcccgcagccc
gaaccgcaggatatctatggcggggcagacatgccgggctcgtctgattcctatgccgcg
gccggttcctatgccacgacctatccctatggcgcacaggaagaagccgcaccgtctgcg
gtgcctgccgtgctggaccctgccagttatgacggtccccgagactgggatacctttctg
ggattctgcaagcagcagaacggcgagggcggacgcagtgtgaatattctgcattccgcc
aagggtgagtttaccgaaggcgagctgcgcatccgcacgcagtccggcattcaatatggc
cgcctgaatgagccggggcttgtggctgtgctgaccgagcgggcccgccagtggttcggc
ccgcagaccaggcttgccgttcttgagcccaccagccgtgtgcgcccctatgccgaactg
cgcaaggaggtggaagaccaccccctgtcgcgcatgctggaagaagaacttggcgccgcg
ctcatccacttccgccacaaggacgaaccaggcaaatag
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