Desulfovibrio subterraneus: LN040_11640
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Entry
LN040_11640 CDS
T08953
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsb03032
]
LN040_11640
03036 Chromosome and associated proteins [BR:
dsb03036
]
LN040_11640
03400 DNA repair and recombination proteins [BR:
dsb03400
]
LN040_11640
DNA replication proteins [BR:
dsb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LN040_11640
Chromosome and associated proteins [BR:
dsb03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LN040_11640
DNA repair and recombination proteins [BR:
dsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LN040_11640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HTH_48
HU-CCDC81_euk_1
SasG_E
Motif
Other DBs
NCBI-ProteinID:
WBF66382
LinkDB
All DBs
Position
2642696..2642983
Genome browser
AA seq
95 aa
AA seq
DB search
MLTKAEFVAALKDALPEVFETKVSAEKAYDAFCKVLADGVVSKSGVRLPSVGAFSVSERA
ARTGRNPQTGKPITIPARKVIKFSAAKALVDDVNK
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaggctgaatttgttgcggctctgaaagacgccctgcccgaagtgttcgaa
accaaggtgagtgccgaaaaggcttacgacgcattttgcaaggttcttgctgacggcgtt
gtatccaagtccggcgtacgtctgcccagcgtcggtgctttctccgtttccgagcgtgct
gcccgtaccggccgcaaccctcagaccggcaagcccatcaccatccccgctcgcaaggtt
atcaagttttccgccgctaaggctctggttgacgacgtcaacaagtag
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