Desulfovibrio subterraneus: LN040_11805
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Entry
LN040_11805 CDS
T08953
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
LN040_11805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
RNase_H_2
DNA_pol_B_exo2
DNA_pol_A_exo1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WBF66414
LinkDB
All DBs
Position
complement(2682670..2685774)
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AA seq
1034 aa
AA seq
DB search
MHDEAEIISEYVGALKASDRLGEQVVYHRVLPEAEAQFAPNKRPWSTAIRDLLAMQGIRE
LYAHQALATDYIRSGRHVVVATPTASGKTFVYNLPVIERFLQDRDARALYLFPLKALAQD
QLKTFRQLTAHWPKEARPEAAIYDGDTTPHFRKKIRTNPPTVLMTNPEMLHLSILPHHEQ
WVQFLASLQYIVVDEVHTYRGVLGSHMAQLFRRLLRICKQYGITPTFIFCSATVGNPGEL
CRQLTGLPESDIQVITQSGAPQGKRHFVFLDPYESPSTAAIQLLKSALSRNLRTIVYTQS
RKMTELISLWAGQKSGPYKERISAYRAGFLPEERREIEAKMSSGELLAVISTSALELGID
IGALDLCILVGYPGTVMATMQRGGRVGRATQESAVVLVAGEDALDQYIMRHPQDFFERPA
EHAVLNPHNPVILKRHLECAAAELSLRPAEPWLQAQDVQSAIHELEMEGLLLRDADDTAI
FAARKRPQRHVDLRGAGNSFHIQTTDGTVIGSVDGIKALRETHPGAVYLHKGTTWTVTSL
DLETRTARVAEDKVDYYTRVRGNKDTEILEVLDQKVVWGTRICLGKLRVTEYISGYERRS
VRGGGNLLGIIPLDLPPQVFETEGLWFEIPMDVQRAMEDAFMHFMGSIHAIEHAAIGILP
LLVMTDRNDLGGISTPMHAQVGKPAVFIYDGMPGGAGLTRLAFERAQDMFERTLAVIRDC
GCELGCPSCVHSPKCGSGNRPIDKAGALDLLLRLGSRDAAADEQLREQFVLQPDSQNSGQ
SNGQYSGQSNSAQLEPSAHAASALTEKPDMATPPAKLAPAGGMEGQSESTHSPLPAGGMP
QDSPSSSANSLSVPKFTPARYAVLDVETQLSAQEVGGWNRAERMRVSVAVLYDSATDAFT
AYTEDRMPEMLKLLEEFELVVGFNILRFDYKVLSAYTTQNLATLPTLDMLDVIRKRLSYR
VSLDNLGSATFDAPKSADGLQALKWWKEGKVDEIARYCEQDVRITRDLYLHGREHGYVLF
TNKAKQKVRILVDW
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgaagcggaaatcatatcggagtacgtgggtgcgctgaaagcgtctgaccgg
cttggcgagcaggtggtctatcatcgcgttctgccggaagcagaggcgcagttcgcgccg
aacaagcgcccgtggtccactgccatacgcgacctgctggccatgcagggcattcgcgag
ttgtatgcgcatcaggcactggcaacagactacatccgctcgggcaggcatgtggtggtg
gcaacccccacggccagcggcaaaaccttcgtctacaacctccctgtgatcgaacgcttt
ctgcaggaccgcgacgcccgtgcgctctacctctttccgctcaaggcgctggcgcaggac
cagctcaagaccttccgccagctgaccgcgcactggcccaaagaagcgcgtccggaagcc
gccatctatgacggcgacaccaccccgcatttccgcaagaagatacgcaccaatccgccc
acggtgctgatgacgaatccggaaatgctgcatctttccattctgccgcaccatgagcag
tgggtgcagtttctggcctcgctccagtatattgtggtggacgaggtgcacacctatcgc
ggcgtgctcggctcgcacatggcgcagctcttccgccgcctgctgcgcatctgcaagcaa
tacggcattacgcccaccttcattttctgctccgccacggtgggcaaccccggcgaactg
tgccgccagctgaccggcctgccggaatccgacattcaggtcatcacgcagagtggcgca
ccgcagggcaagcggcatttcgtttttctggacccgtatgagagcccttccaccgctgcc
atacagcttttgaaatctgcgctttcccgcaacctgcgcaccatcgtgtatacgcagtcg
cgcaagatgacggagcttatcagcctgtgggcgggccagaaatccggcccgtacaaggag
cgcatctccgcctaccgggcaggctttcttcccgaagaacgacgcgagattgaagcaaag
atgtccagcggcgaactgcttgcggtcatctccaccagtgcgcttgagctgggcatagac
ataggcgcgctcgacctgtgcattctggtgggctaccccggcacggtcatggcgaccatg
cagcgcggcggccgtgtgggccgtgccacgcaggaaagtgccgtggtgctggtggcgggt
gaggatgcgctggatcagtatatcatgcggcatccgcaggacttttttgaacgccccgcc
gagcatgcggtgttgaacccgcataatccggtgattctgaaacggcatctggaatgcgcg
gcggcggaactgagcctgcgccccgcagaaccgtggctgcaggcgcaggacgtgcagagc
gccatacatgaactggagatggaaggcctgctgctgcgcgatgcggacgacaccgccata
tttgccgcacgcaaacggccacagcgccatgtggacttgcgcggcgcgggcaacagcttt
catatccagaccacggacggcacggtcatcggcagcgtggatggcataaaagccctgcgc
gaaacccaccccggtgcggtgtatctgcacaagggcaccacgtggaccgtcacatcgctg
gaccttgaaacccgcacggcccgcgtggccgaagacaaggtggactattacacccgcgtg
cgcggcaacaaggataccgagattctggaagtgctggaccagaaggtggtgtggggcacc
cgcatctgcctcggcaagctgcgcgttaccgaatatatcagcggatacgaacggcgcagc
gtgcgcggtggcggcaacctgctcggcatcatcccgctggacctgccgccgcaggttttc
gaaaccgaaggcctgtggttcgagatacccatggacgtgcagcgcgccatggaagacgcc
ttcatgcacttcatgggctccatccacgccattgagcacgcggccataggcattctgccc
ctgctggtcatgacggaccgcaacgaccttggcggcatttccacgcccatgcacgcgcag
gtgggcaagcctgcggtattcatctacgacggcatgcccggtggcgcagggctgaccaga
ctggcctttgaacgggcgcaggacatgtttgagcgcacgcttgcggttatccgcgactgc
ggctgcgaactggggtgcccttcgtgcgtgcactcacccaagtgcgggtccggcaacagg
cccatagacaaggccggagcccttgatctgctgctgcgcctcggttcccgcgatgccgcc
gctgatgaacagttacgcgaacagttcgtattacaacctgacagtcaaaatagtgggcaa
tccaacgggcaatacagcgggcaatccaactctgcgcagcttgagccctccgcacatgct
gcctctgccctaacagagaaacctgacatggcaacgcctcctgccaagcttgctcccgct
ggcgggatggaagggcaaagcgaatcgacacattcccccctgcccgccggaggcatgccg
caagattcaccctcatcgtctgccaattctctttccgttccgaaattcacccctgcccgc
tatgcggtgctggacgtggaaacccagctttccgcgcaggaagtcggcggctggaaccgt
gccgaacgcatgcgcgtgagtgttgcggttctctacgattccgcaacggatgcctttacc
gcctacacggaagaccgcatgcccgagatgctgaagctgcttgaagagtttgagcttgtg
gtgggcttcaatatcctgcgtttcgactacaaggtgctgtcggcctataccacgcagaac
cttgccaccctgcccacgctggatatgctggatgtaatccgcaagcggctgagttaccgc
gtttcgctggataatctgggttcggccacctttgatgctcccaagtctgcggacgggttg
caggcgctcaaatggtggaaggaaggcaaggtggacgagattgcccgctactgcgagcag
gacgtgcgcataacccgcgatttgtacctgcacggccgcgagcacggctatgtgcttttt
accaataaagccaagcagaaagtccgcattctcgtggactggtag
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