Desulfovibrio subterraneus: LN040_12230
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Entry
LN040_12230 CDS
T08953
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsb03400
]
LN040_12230 (dinB)
Enzymes [BR:
dsb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LN040_12230 (dinB)
DNA repair and recombination proteins [BR:
dsb03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
LN040_12230 (dinB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
IMS_HHH_1
POLH-Rev1_HhH
Motif
Other DBs
NCBI-ProteinID:
WBF66493
LinkDB
All DBs
Position
2783278..2784462
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AA seq
394 aa
AA seq
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MQRWIMHLDMDAFFASVEQLDHPEWRGKPVIVGGRERGVVSAASYEARKYGVRSAIPVAR
AQKLCPHGIFTRGNMARYAEVSRQIMALLGNYSPLVEPASIDEAYLDATGLERIFGSVED
MARSIKRDIKAAVGLNCSIGIAPVKFLAKIASDYNKPDGLFILWPENVPAFLASLPVAKI
PGVGGKFVAELEKLGVTTCKDVLGYPDSFWARRFGKSGESLWRRAQGIDTRKVETDQVAK
SESAENTFAQDTDDVELLKKWLLKQAERVGRNQRRMGVKGRTVTLKLKYADFTSITRSRS
LPESTDSTDVIFRTACELLDGVKLQQKVRLIGVGLSNYGKGPEQLSLLDGSAGGQTGGMV
ATAKQRNLDKALDTLREKFGRDAVTRGRLFDFDK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgatggataatgcatctggacatggatgccttttttgcttccgtagagcagctc
gaccatccggaatggcgcggcaagcccgtcattgtgggggggcgcgagcgtggggttgtt
tccgcagcatcctacgaagcccgcaaatacggtgtgcgttcggccattcccgtggcccgc
gcccagaagctgtgtccgcacggcatcttcacgcgcggcaatatggcccgctatgcggaa
gtgtcgaggcagatcatggcgctgctcggcaactattcaccccttgtcgaacctgcttcc
attgacgaagcctatctggatgccacagggcttgagcgcattttcggatcggttgaggat
atggcccgcagcattaagcgggacattaaggccgctgtggggcttaactgctccataggc
attgcgccggtgaagtttcttgcgaaaattgcttccgactataacaagccggacggcttg
ttcatactgtggccggagaatgtgcctgcatttctggcaagcctgcccgtggccaaaatt
ccgggtgtgggcggcaagtttgtcgcggaactggaaaagctgggggtgaccacctgcaag
gatgtgctggggtatccggacagcttctgggcgcggcggttcggcaaatctggcgaatcg
ttgtggcgcagggctcagggcattgatacccgcaaggtggaaacagatcaggtcgccaag
tccgaaagtgctgaaaacacctttgcgcaggataccgacgatgtggaattgctgaaaaaa
tggctgctgaagcaggcggaacgcgtggggcgaaaccagcgtcgcatgggggtgaagggg
cgcaccgtcacgctgaaactcaagtatgccgatttcacatccataacccgtagccggagc
ctgcctgaatcgaccgattcaacggatgtgatcttccgcacagcctgcgagctgctggat
ggagtgaagctgcagcagaaggtgcggctcatcggggtggggctttccaactacggcaag
gggccggagcagctgagcctgctcgacggcagcgccggcggccagaccggcggcatggta
gccactgcaaagcagcgcaatctcgacaaggcgctggacactctgcgcgaaaagttcggg
cgcgatgctgttacgcgtggcaggctgttcgactttgacaagtag
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