Desulfovibrio subterraneus: LN040_12505
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Entry
LN040_12505 CDS
T08953
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00220
Arginine biosynthesis
dsb00240
Pyrimidine metabolism
dsb00250
Alanine, aspartate and glutamate metabolism
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
dsb01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LN040_12505 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LN040_12505 (carB)
00220 Arginine biosynthesis
LN040_12505 (carB)
Enzymes [BR:
dsb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
LN040_12505 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
ATP-grasp_2
CoA_binding_2
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
WBF66546
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Position
complement(2843281..2846544)
Genome browser
AA seq
1087 aa
AA seq
DB search
MPKRTDLKRIMVIGSGPIVIGQACEFDYSGTQAIKALKEEGYEVVLVNSNPASIMTDPEL
ADRTYIEPIEPETVAAIIRKERPCAVLPTLGGQTGLNTALAVAKMGVLEECGVELIGATE
SVIEKAESRELFRQAMDNIGLKVPQSSIARTMDDVRRIGEEMAFPIIIRPAFTLGGKGGG
IAYNMEDLEQIASQGLAASISSEILLEQSVLGWKEYEMEVMRDKADNCVIICSIENFDPM
GVHTGDSITVAPAQTLTDLEYQKMRDASIAIMREIGVETGGSNVQFGVNPENGDLVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDEIPNDITRETMASFEPTIDYVVTKLPR
FTFEKFPGSKDELNTAMKSVGEAMSIGRTFKESLQKGLRSLEIGAFGLGRDFRGKQPDRE
EVIAKLRTPNSRRMFYVRNAMLQGMSNEEIFDLTKIDPWFLHQIRDILKVEDELRDFGLA
NSLTPDNADLVDLMRRAKEYGFSDRQLAEMWKQPELAIRQLRKEMGIMPTYYLVDTCASE
FEAYTPYFYSTYETGKEIVVEDRKKVIILGGGPNRIGQGIEFDYCCCHASFALRDMGVQS
IMVNSNPETVSTDYDTSDRLYFEPLTYEDVMNIVETEKPDGVIIQFGGQTPLNLAVPLLR
SGVPILGTHPDSIDRAEDRERFQALIQKLKLTQPDNATVMTLEEARKVAERITYPLVVRP
SYVLGGRAMEIVYDDEQLATYFRDVVGTAAPEHPILLDKFLESAIEVDVDALADGTDVYV
AGIMEHIEEAGIHSGDSACSLPPFSLPQNIVDEITRQTIALAKELKVIGLMNIQFAVKDG
TIFILEVNPRASRTAPFVSKATGVPLPRLATQVMMGKTIKELNPASMRKSGYISVKESVF
PFSRFPGVDILLGPEMRSTGEVMGIADTFEEAFMKGQLACGQRLPQSGKVFISVNDRDKS
NILDVARKFHELGFEILATTGTSQLFVENGVPATRVAKVYEGRPNIVDFIKNGEVALLLN
TASGKRTVEDSKSIRQATLLYGVPYSTTVSGARAIAMAIAEQRRCGLNVKSIQEYYAGDK
TEPACKG
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaggactgacttaaagcgcatcatggtcatcggttccggccccattgtcatc
ggacaggcctgtgaattcgactactccggaacccaggccatcaaggccctgaaggaagaa
ggatacgaagtggtgttggtgaactccaaccccgcaagtatcatgaccgatcccgagctt
gcagaccgcacctacatcgaacccatcgaaccggaaaccgtagccgccatcatccgcaag
gaacgtccctgtgcggtgctgcccacgctgggcggccagaccggcctgaataccgcgctg
gcggttgccaagatgggcgttctggaagagtgcggcgttgagctcatcggcgccaccgaa
tcggtcatcgaaaaggcggaaagccgcgaactgttccgtcaggccatggataacatcggc
ctcaaggtaccccaatcctccattgcccgcaccatggacgacgttcgccgcatcggcgaa
gagatggccttccccatcatcatccgtcccgcattcaccctcggcggcaagggcggcggt
attgcctacaacatggaagaccttgaacagatcgcatcgcagggtcttgccgcatccatt
tcttccgaaatccttctggaacagtccgtactgggctggaaagaatatgaaatggaagtc
atgcgcgacaaggcagacaactgtgtcatcatctgctccattgaaaactttgatcccatg
ggcgtgcacaccggcgactccatcaccgttgcccccgcgcagaccctgaccgatcttgaa
taccagaagatgcgcgatgcctccatcgccatcatgcgcgaaattggcgtggaaaccggc
ggctccaacgtgcagttcggtgtgaaccccgaaaacggcgaccttgtggtcattgaaatg
aacccccgcgtcagccgctcttccgcccttgcttccaaggcaacgggcttccccatcgcc
aagatcgccgcaaagcttgccgtgggctacacgctggacgagattcccaacgacatcacc
cgcgagaccatggcctctttcgagccgaccatcgactacgtggtgaccaagctgccccgc
ttcacctttgaaaaattccccggttccaaggacgagctgaacaccgccatgaagagcgtg
ggcgaagccatgtccataggccgcaccttcaaggaatcgctgcaaaagggtctgcgctcg
ctggaaatcggcgcattcggccttggccgcgacttccgcggcaagcagcccgaccgtgaa
gaagttatcgccaagctgcgcacccccaactcgcgccgcatgttctacgtgcgcaacgcc
atgctgcagggcatgagcaacgaggaaatattcgacctcaccaagatcgacccgtggttc
ctgcaccagatcagagacattctcaaggttgaggacgaactgcgcgacttcggccttgcc
aactcgctcacgccggacaacgccgacctcgtggaccttatgcgccgcgccaaggaatac
ggcttttccgaccgccagctcgccgagatgtggaagcagcccgaactggccattcgccag
ctgcgcaaggaaatgggcattatgcccacatattaccttgtggatacctgcgcttccgaa
ttcgaggcatacaccccctatttctactccacctatgaaacgggcaaggaaatcgtcgtg
gaagaccgcaaaaaggtcatcatcctcggcggcggccccaaccgtatcggtcagggcatc
gagttcgactactgctgctgtcatgcctccttcgcactgcgggacatgggcgtgcagtcc
atcatggtcaactccaacccggaaaccgtctccaccgactatgacacttccgaccgtctc
tactttgagccgctcacctatgaagatgtcatgaacatcgtggaaacggaaaagcccgac
ggcgttatcattcagtttggcggccagaccccgctgaaccttgccgtgccgctgctgcgc
tccggcgtgccgattctgggtacccaccccgactccatcgaccgcgcagaagaccgcgag
cgcttccaggcccttatccagaagctcaagctcacccagcccgacaacgccaccgtcatg
acgctggaagaagcccgcaaggtggccgagagaatcacctatccgctggtggtgcgcccc
tcctacgtgctgggcggccgggccatggaaatcgtgtatgatgacgagcagctcgccacc
tacttccgcgacgtggtaggcaccgcagcgccggagcaccccattctgctcgacaagttc
cttgaaagcgccattgaagtggatgtggacgcccttgccgacggcaccgacgtatacgtg
gcaggcatcatggagcacattgaagaagccggcatccattccggcgactcggcctgctcg
ctgcctcccttctcgctgccccagaacatcgtggacgagatcacccgccagaccatcgct
cttgccaaggagctgaaggttatcggcctcatgaacatccagttcgcggtgaaggacggc
accatcttcatccttgaagtgaacccccgcgcatcgcgtaccgccccgttcgtttccaag
gcaacgggtgtgccgctgccgcgccttgccacgcaggtgatgatgggcaagaccatcaag
gaactgaaccccgcatccatgcgcaagtccggctacatctcggtgaaggaatccgtgttc
ccgttcagccgtttccccggcgtggacattctgctcggacccgaaatgcgctccaccggc
gaggtaatgggcattgcagacaccttcgaagaagccttcatgaagggtcagcttgcctgc
ggccagcgcctgccccagtccggcaaggtcttcatctcggtgaatgaccgcgacaagtcc
aatattctcgatgtggcccgcaagttccacgagctgggttttgaaatccttgccactacc
ggcacctcgcaactctttgtcgagaacggcgtgcccgccacccgtgttgccaaggtgtat
gaaggacgccccaacatcgttgacttcatcaagaacggcgaagtagctttgctgctgaac
accgcatccggcaagcgcacggtggaagattccaagtccatccgtcaggctacgctgctc
tacggcgttccctactccaccaccgtctccggcgcccgcgccatcgccatggcgattgcg
gaacagcgccgctgcggtctgaatgtgaagagcattcaggaatactacgcgggcgacaaa
accgaacccgcctgcaaggggtaa
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