Desulfovibrio subterraneus: LN040_13845
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Entry
LN040_13845 CDS
T08953
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00061
Fatty acid biosynthesis
dsb00071
Fatty acid degradation
dsb01100
Metabolic pathways
dsb01212
Fatty acid metabolism
dsb02024
Quorum sensing
dsb04146
Peroxisome
Module
dsb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LN040_13845
00071 Fatty acid degradation
LN040_13845
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LN040_13845
09145 Cellular community - prokaryotes
02024 Quorum sensing
LN040_13845
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dsb01004
]
LN040_13845
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsb04147
]
LN040_13845
Enzymes [BR:
dsb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LN040_13845
Lipid biosynthesis proteins [BR:
dsb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LN040_13845
Exosome [BR:
dsb04147
]
Exosomal proteins
Exosomal proteins of breast milk
LN040_13845
Exosomal proteins of breast cancer cells
LN040_13845
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WBF66795
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All DBs
Position
3174348..3176120
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AA seq
590 aa
AA seq
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MEPLEKLTLQAVLDRSATHFANDPAVSYVGGEIITYGEFAETVESLSRLLAEQGVVRGDK
VAILSESCPHWSMAYFAITGMGAVAVPILPDFHPDAIHHILRHSESSVVFVSERLYTKLE
DGQFDEQPQCILMETFSPVGLDEGKDRLKELKKTGMREFRKWKDKAWRMAERFSERVSHK
LGEENPSEFSEVVEGLFDEERYEVKPDDVAAIIYTSGTTGHSKGVVLTHGNIVSNAISVV
ETIIKVAPGDRMLSILPLSHTYECTLGMVLPLAHGAHIYYMDKPPTARALLPALAQVRPS
IMLSVPLVIEKIFKTAILPKLTGTWLKRNLYRIPAVRKKLNAVAGKKLLETFGGRLRMFC
IGGAALAPDVELFLREAGFPYGLGYGLTETSPLCAGDAPGRAKLYSIGKPLHGVEIRILD
KDPATGEGEIAVKGPNVMREYYKAPEISKATFTEDGWFRTGDLGKLDSDGHLYIKGRLKN
VIIGPSGENIYPEEIEGVIMQSAWVLESIVYQMDGKLVARVHIDYAKTDEEFGSLAAAKM
QAKINDVLESLRQQVNNKVSAFSKLHKIIEQTEPFEKTPTHKIKRYLYVD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggagccattggagaagctgacgcttcaggcggtgctggacagaagcgcaacccatttt
gcgaatgatcctgccgtctcgtatgtgggcggggagatcataacctacggggaatttgcc
gaaacggtggaatccttgagccggttgcttgcggaacagggcgtggtacgcggagacaag
gttgccattctcagcgaaagctgcccgcactggtccatggcctatttcgccattaccggt
atgggggctgttgccgtcccgattctgccggattttcatcccgatgccatacatcatatt
ttgcgccattccgaatcgagcgtggtgttcgtgtccgagaggctctacaccaagcttgaa
gacggccagtttgacgagcagccccagtgcattctcatggagacgttttctcccgtcggg
ctggacgaaggcaaggacaggctcaaggaactgaaaaaaaccggcatgcgcgaattccgt
aagtggaaggacaaggcatggcgcatggcggagcgtttttccgaacgcgtgagccacaag
ctgggcgaagaaaaccccagtgagttttctgaagtggtggaaggcctgttcgatgaagaa
cggtatgaggtgaagcccgacgacgtggccgccatcatctatacatccggtaccacaggc
cattccaagggcgtggtgctcacgcacggcaacatcgtttcaaacgccatctccgtggtg
gaaaccattatcaaagttgcccccggcgacaggatgctctccattctcccgctttcgcac
acctatgaatgcactctcggcatggtgctgccgctggctcacggcgcgcacatctactac
atggacaagccgcccacggcccgcgcgctgctgcctgctcttgcgcaggtgcgtccctct
atcatgctctccgtgccgctggtcatagaaaagatattcaagacggccattctgcccaag
ctgaccggcacatggctcaaacgcaatctctatcgcattcctgccgtccgcaaaaagctc
aacgccgttgcaggcaagaagctgctggaaacctttggcggacgcctgcgcatgttctgc
atcggcggagctgcgctggcacccgacgtggagctctttctgcgcgaggcgggctttccc
tatggcctcggttacggcctgacggaaaccagccccctgtgtgctggcgatgcaccgggc
agggccaagctctattccataggtaagcccctgcacggtgtggaaatccgcattctggac
aaggaccccgccaccggcgagggcgagattgccgtgaaaggccccaacgtgatgcgcgag
tattacaaggctccggaaatttccaaggccaccttcacggaagacggctggttccgcacc
ggcgatctgggcaagctggacagcgacggccacctgtatatcaagggacggctcaagaac
gtgatcatcggtcccagcggggagaacatctaccccgaagaaatcgagggcgtgatcatg
cagtccgcatgggtgcttgagagcatcgtctatcagatggacggcaagctggttgcccgc
gtgcacatagattacgccaagacggatgaagaattcggcagtctggctgcggccaagatg
caggccaagatcaacgatgtgctcgaatccctgcggcagcaggtgaacaataaggtttcc
gctttctccaaactgcacaagatcatcgagcagaccgagccgtttgaaaaaacgcccacg
cacaagatcaagcgctatctctacgtagactaa
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