Desulfovibrio subterraneus: LN040_14185
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Entry
LN040_14185 CDS
T08953
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00541
Biosynthesis of various nucleotide sugars
dsb01100
Metabolic pathways
dsb01250
Biosynthesis of nucleotide sugars
Module
dsb_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN040_14185 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
dsb01005
]
LN040_14185 (rfaD)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
LN040_14185 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
dsb01005
]
Core region
LN040_14185 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
KR
Motif
Other DBs
NCBI-ProteinID:
WBF66858
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All DBs
Position
3251477..3252448
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AA seq
323 aa
AA seq
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MYIVTGGAGFIGSAMVWKLNEMGITDIVVVDNLASTEKWKNLVNRTYVDYLHRDAFLDLV
LHDEMPWDVTAIIHMGACSSTTERDADFLMDNNLRYTKAMCEYALEHDARFINASSAATY
GDGALGFEDSVDSMFRLKPLNMYGYSKQLFDLWAHREGVLDRLASLKFFNVYGPNEYHKG
NMMSVVCKAFSQIGETGKMKLFKSYHPDYTDGGQKRDFVYVKDCVDAMWWLLENPQANGL
FNIGTGTAREWNDLARSVFAAMGKEPVIEYTEMPEELRGKYQYFTEAPMQRLKAAGCPVT
FRSLEDGARDYVQNYLAQADPYL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcgtaaccggaggcgcaggattcatcggcagcgccatggtatggaagctcaac
gagatgggcatcaccgacatcgtggtggtggacaatctcgccagcacggaaaagtggaag
aacctcgtcaaccgcacctacgtggactacctgcaccgcgatgcctttctcgatctggtg
ctgcacgatgagatgccctgggacgtaaccgccatcatccacatgggcgcgtgttcctcc
accacggagcgggatgccgacttcctgatggacaacaacctgcgctacaccaaggccatg
tgcgaatacgcgcttgagcacgatgcccgcttcatcaatgccagctcggctgccacctat
ggtgacggcgcactgggatttgaagattccgtggattccatgttccgactcaagcctttg
aacatgtacggatattccaagcagctctttgatctctgggcgcaccgcgagggcgtgctg
gaccgtctggccagcctgaagttcttcaacgtttacggcccgaacgaataccacaagggc
aacatgatgagcgttgtctgcaaggcgttttcgcagatcggcgaaaccggcaagatgaag
ctcttcaagtcctaccatcccgattacacagacggcggccagaagcgcgacttcgtgtac
gtgaaggactgcgtggacgccatgtggtggctgcttgagaacccgcaggccaacgggctg
ttcaacatcggcaccggcactgcccgcgagtggaacgaccttgcgcgttcggtgttcgcc
gccatgggcaaagagcctgtcattgaatacaccgagatgcccgaagaactgcgcggcaag
taccagtatttcaccgaagcgcccatgcagcgcctgaaggctgccggatgccctgtaacc
ttccgcagtcttgaagacggcgcacgcgactatgtgcagaactatctggcacaggccgac
ccgtacctgtaa
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