Desulfovibrio subterraneus: LN040_14440
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Entry
LN040_14440 CDS
T08953
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
dsb
Desulfovibrio subterraneus
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
dsb02022
]
LN040_14440
Two-component system [BR:
dsb02022
]
NtrC family
Unclassified
LN040_14440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
Mg_chelatase
AAA
FleQ
AAA_16
HTH_30
AAA_3
TIP49
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
WBF66906
LinkDB
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Position
complement(3316843..3318252)
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AA seq
469 aa
AA seq
DB search
MATILVVDDDPQLRQSFERLLKAEGHTVLTAPSGEKGVEIASESEPDMAVLDVRLPGMNG
LETFKVLRGMYPSLPVLVMTAYGTTETAIEATKMGAFDYVMKPFNVPNVLSLIGRAVEVR
APRPVSNDSVATSDALLGRSVAMQEVCKQIGRAAPTQATVLIRGESGTGKELVAHAIHKH
SNRSDHPFCVINCVAIPETLLESELFGYEKGAFTGASNRKAGKIEQANRGTVFLDEIGDM
PPPIQAKILRLLQERQIERLGGKLPIPVDVRIIAATNRDLEKAVASGEFREDLYYRLNVV
SLTLPPLRERREDISLLGAHFLEKFAKELNMPNPGLTDRAKAALQDFPWPGNVRELGNMM
QKALIFSRGLAIDAEDIAALLGGAVSTSGGLDENTEESVVRWVRHALLAEPGDGLFESLG
DRFCAIVIREALTLTGGNRTRASKLLGMSRPTLIARIEKYGLKVEASVS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctacgatcctagtggtggacgacgatccgcagctccgccagagcttcgagcgtctc
ctgaaggccgaggggcacaccgtgctcacggcgccgagcggagaaaaaggggtggaaatc
gcctcagagtcagaaccggacatggccgtacttgatgtacgcctgcccggtatgaacgga
ctggaaacattcaaggtgctgcggggtatgtatccctcactgccggttctcgtcatgacg
gcttacggcaccaccgaaacagccatcgaagccaccaagatgggggccttcgattatgtc
atgaaacccttcaacgttccgaatgttctttcccttatcggtcgtgccgttgaggtgcgt
gccccaaggccggtttcaaacgactcggtcgccacctcagacgccctgctcgggcgcagc
gtggccatgcaggaagtctgcaagcagataggccgcgccgctcccacgcaggccacagtt
cttatccgcggggaatccggcaccggcaaggaacttgtggcccacgccatacacaagcac
agcaaccggtctgaccaccccttctgtgtcatcaactgcgttgccattcccgaaaccctg
ctggaaagcgaactcttcgggtacgaaaaaggcgccttcaccggagccagcaaccgcaag
gcaggcaagattgaacaggccaaccgcggcacggtgtttctcgacgaaataggcgacatg
ccgccccccattcaggcaaagattctgcgcctgctgcaggaacgccagatagaacgcctc
gggggcaagctccccattcccgtggacgtgcgcatcatcgccgccaccaaccgtgatctt
gaaaaggctgtggcttccggcgagttccgcgaagacctctactaccggctgaacgtggtt
tcgctcacgctgccccccctgcgggagcggcgtgaagacatttccctgctgggcgcccat
tttctggaaaagttcgccaaggaactcaacatgcccaaccccgggctcacggaccgggcc
aaggccgccctgcaggactttccctggccgggcaacgtgcgcgagcttggcaacatgatg
cagaaggcccttatcttcagccgcggcctggccatagatgcagaagacatagccgccctg
ctcggcggtgccgtttcaacgtccggcggactggacgagaacacggaagaatccgtggtg
cgctgggtgcgccatgcactgcttgcggaacccggcgacgggcttttcgaatcgctgggt
gacaggttctgcgccatagtcatacgcgaggcactcacgcttaccggaggcaaccggaca
agggcatccaagctgctgggcatgtcacgccccacgctcatagcacgcattgaaaaatac
ggactcaaggtagaagcctctgtcagctga
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