Desulfovibrio subterraneus: LN040_14680
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Entry
LN040_14680 CDS
T08953
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
dsb
Desulfovibrio subterraneus
Pathway
dsb00521
Streptomycin biosynthesis
dsb00523
Polyketide sugar unit biosynthesis
dsb00541
Biosynthesis of various nucleotide sugars
dsb01100
Metabolic pathways
dsb01110
Biosynthesis of secondary metabolites
dsb01250
Biosynthesis of nucleotide sugars
Module
dsb_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
dsb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LN040_14680 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LN040_14680 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LN040_14680 (rfbC)
Enzymes [BR:
dsb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LN040_14680 (rfbC)
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WBF66952
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All DBs
Position
complement(3373347..3373898)
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AA seq
183 aa
AA seq
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MQIVQTGIPGLVVLEPKVHGDHRGFFIETYRKETLQQAGLPHDFVQDNHARSEQAGVLRG
LHFQLPPVSQAKLVWVTRGSVFDVAVDLRAGSPTFKQCYTLVLSEQNFKRLLIPRGFAHG
YMTLERGTEFQYKVDAYYDPKMEGGIAWNDPDLAIEWPDMAPVLSEKDKLLPALRDFATP
FVY
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ttgcagatcgtacaaaccggcattccggggctggtcgtcctggaacccaaagttcacgga
gaccaccgcggtttcttcattgaaacgtaccgtaaggaaaccctgcaacaggcagggctg
ccgcacgactttgtgcaggacaatcacgcccgctccgagcaggcaggcgttcttcgcgga
ctacatttccagctgccaccggtatcacaggctaaactggtgtgggtaacacgcggctcc
gtctttgacgttgcagttgatctgcgggccggctcgcccaccttcaagcaatgctacacg
cttgttctttccgaacagaatttcaaacgcctgctcattccgcgcggctttgcgcatggc
tatatgactctggagcggggaaccgagttccagtacaaggtcgacgcctactacgatccc
aagatggaagggggaattgcgtggaatgaccccgacctcgccatagaatggccggatatg
gcacccgttttatccgaaaaagacaagctgctgccggcattgcgggacttcgccacgcct
tttgtctactaa
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